.Rhistory

value: avgValue,
height: avgValue,
hexId: hexId
},
geometry: {
type: "Polygon",
coordinates: [boundary.map(([lat, lng]) => [lng, lat])]
}
};
});
const maxValue = Math.max(...features.map(f => f.properties.value));
features.forEach(f => {
f.properties.height = (f.properties.value / maxValue) * maxHeight;
});
const colorScale = d3.scaleSequential(d3.%s).domain([0, maxValue]);
if (map.getSource("hexagons")) {
map.getSource("hexagons").setData({ type: "FeatureCollection", features: features });
} else {
map.addSource("hexagons", {
type: "geojson",
data: { type: "FeatureCollection", features: features }
});
map.addLayer({
id: "hexagons",
type: "fill-extrusion",
source: "hexagons",
paint: {
"fill-extrusion-color": [
"interpolate",
["linear"],
["get", "value"],
0, colorScale(0),
maxValue, colorScale(maxValue)
],
"fill-extrusion-height": ["get", "height"],
"fill-extrusion-base": 0,
"fill-extrusion-opacity": 0.8
}
});
map.on("click", "hexagons", (e) => {
new mapboxgl.Popup()
.setLngLat(e.lngLat)
.setHTML(`<strong>Value:</strong> ${e.features[0].properties.value.toLocaleString()}`)
.addTo(map);
});
map.on("mouseenter", "hexagons", () => {
map.getCanvas().style.cursor = "pointer";
});
map.on("mouseleave", "hexagons", () => {
map.getCanvas().style.cursor = "";
});
}
}
document.getElementById("heightSlider").addEventListener("input", (event) => {
maxHeight = event.target.value;
document.getElementById("heightValue").innerText = maxHeight;
updateMap();
});
document.getElementById("resolutionSlider").addEventListener("input", (event) => {
h3Resolution = event.target.value;
document.getElementById("resolutionValue").innerText = h3Resolution;
updateMap();
});
document.getElementById("layerSelect").addEventListener("change", (event) => {
map.setStyle(event.target.value);
});
map.on("load", updateMap);
map.addControl(new mapboxgl.NavigationControl());
</script>
</body>
</html>',
value_col, max_height, max_height, h3_resolution, h3_resolution, mapbox_token, map_center[1], map_center[2], map_zoom, data_json, h3_resolution, max_height, color_palette)
writeLines(html_content, output_file)
message("Hexagon Map has been created: ", output_file)
# Automatically open the map in RStudio Viewer if available
if (rstudioapi::isAvailable()) {
rstudioapi::viewer(output_file)
} else if (interactive()) {
browseURL(output_file)
}
invisible(NULL)
}
map <- create_3D(index, "green_index","pk.eyJ1Ijoic2FjaGl0Mjc5MCIsImEiOiJjbHhxMjRnNHIwdG1lMnJxcjV6cGluc3A1In0.NACDYBfi7PDrJgAvzImuVA", output_file = "zurich_green_index_map.html")
# Declare global variables to avoid R CMD check warnings
utils::globalVariables(c("lon", "lat", "value"))
#' Create a 3D Hexagon Map Using H3 and Mapbox GL JS
#'
#' This function creates a 3D hexagon map using H3 and Mapbox GL JS. The input data can be points, linestrings, polygons, or multipolygons.
#'
#' @param data An sf object containing geographical data.
#' @param value_col Character, the name of the value column.
#' @param label_col Character, the name of the label column (optional).
#' @param mapbox_token Character, your Mapbox access token.
#' @param output_file Character, the file path to save the HTML file. Default is "hexagon_map.html".
#' @param color_palette Character, the D3 color scheme to use. Default is "interpolateViridis".
#' @param max_height Numeric, the maximum height for the hexagons. Default is 5000.
#' @param map_center Numeric vector of length 2, the center of the map. Default is NULL.
#' @param map_zoom Numeric, the zoom level of the map. Default is 11.
#' @param h3_resolution Numeric, the H3 resolution for hexagons. Default is 9.
#' @return NULL
#' @importFrom jsonlite toJSON
#' @importFrom dplyr select rename mutate
#' @importFrom sf st_transform st_coordinates st_geometry st_centroid st_point st_cast
#' @examples
#' \donttest{
#'   library(dplyr)
#'
#'   # Generate random data for Zurich
#'   set.seed(123)
#'   lon <- runif(100, min = 8.49, max = 8.56)
#'   lat <- runif(100, min = 47.35, max = 47.42)
#'   green_index <- runif(100, min = 0, max = 1)
#'   data <- data.frame(lon = lon, lat = lat, green_index = green_index)
#'   data_sf <- st_as_sf(data, coords = c("lon", "lat"), crs = 4326)
#'
#'   # Specify your Mapbox access token
#'   mapbox_token <- "your_mapbox_access_token_here"
#'
#'   # Create the 3D hexagon map
#'   create_hexmap_3D(
#'     data = data_sf,
#'     value_col = "green_index",
#'     mapbox_token = mapbox_token,
#'     output_file = "zurich_green_index_map.html",
#'     color_palette = "interpolateViridis"
#'   )
#' }
#' @export
create_3D <- function(data, value_col, label_col = NULL, mapbox_token,
output_file = "hexagon_map.html",
color_palette = "interpolateViridis",
max_height = 5000,
map_center = NULL,
map_zoom = 11,
h3_resolution = 9) {
# Check if the data is an sf object
if (!inherits(data, "sf")) {
stop("Input data must be an sf object")
}
# Transform data to WGS 84 (EPSG:4326)
data <- sf::st_transform(data, 4326)
# Function to convert geometries to points
convert_to_point <- function(geometry) {
geom_type <- sf::st_geometry_type(geometry)
if (geom_type == "POINT") {
return(geometry)
} else if (geom_type == "LINESTRING" || geom_type == "MULTILINESTRING") {
return(sf::st_point(sf::st_coordinates(geometry)[floor(nrow(sf::st_coordinates(geometry)) / 2), ]))
} else if (geom_type == "POLYGON" || geom_type == "MULTIPOLYGON") {
return(sf::st_centroid(geometry))
} else {
stop("Unsupported geometry type")
}
}
# Convert all geometries to points
data_points <- sf::st_sfc(lapply(sf::st_geometry(data), convert_to_point), crs = 4326)
# Get coordinates and values
coords <- sf::st_coordinates(data_points)
values <- data[[value_col]]
if (nrow(coords) != length(values)) {
stop("Mismatch between the number of coordinates and values")
}
# Prepare data
data_prepared <- data.frame(lon = coords[, 1], lat = coords[, 2], value = values)
data_json <- jsonlite::toJSON(data_prepared, dataframe = "rows")
# Determine map center if not provided
if (is.null(map_center)) {
map_center <- c(mean(data_prepared$lon), mean(data_prepared$lat))
}
# Create HTML content
html_content <- sprintf('
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Hexagon Map</title>
<script src="https://api.mapbox.com/mapbox-gl-js/v2.9.1/mapbox-gl.js"></script>
<link href="https://api.mapbox.com/mapbox-gl-js/v2.9.1/mapbox-gl.css" rel="stylesheet" />
<script src="https://unpkg.com/h3-js"></script>
<script src="https://d3js.org/d3.v7.min.js"></script>
<style>
body { margin: 0; padding: 0; }
#map { position: absolute; top: 0; bottom: 0; width: 100%%; }
#legend {
position: absolute;
bottom: 30px;
right: 10px;
background: rgba(255,255,255,0.8);
padding: 10px;
border-radius: 3px;
}
.legend-key {
display: inline-block;
width: 20px;
height: 20px;
margin-right: 5px;
}
.legend {
font-family: Arial, sans-serif;
font-size: 12px;
}
.legend-title {
font-weight: bold;
margin-bottom: 5px;
}
#controls {
position: absolute;
top: 10px;
left: 10px;
background: rgba(255,255,255,0.8);
padding: 10px;
border-radius: 3px;
font-family: Arial, sans-serif;
}
.control-group {
margin-bottom: 10px;
}
</style>
</head>
<body>
<div id="map"></div>
<div id="legend" class="legend">
<div class="legend-title">%s</div>
</div>
<div id="controls">
<div class="control-group">
<label for="heightSlider">Max Height: <span id="heightValue">%d</span></label>
<input type="range" id="heightSlider" min="1000" max="10000" step="500" value="%d">
</div>
<div class="control-group">
<label for="resolutionSlider">H3 Resolution: <span id="resolutionValue">%d</span></label>
<input type="range" id="resolutionSlider" min="0" max="15" value="%d">
</div>
<div class="control-group">
<label for="layerSelect">Select Layer:</label>
<select id="layerSelect">
<option value="mapbox://styles/mapbox/dark-v10">Dark</option>
<option value="mapbox://styles/mapbox/light-v10">Light</option>
<option value="mapbox://styles/mapbox/streets-v11">Streets</option>
<option value="mapbox://styles/mapbox/outdoors-v11">Outdoors</option>
<option value="mapbox://styles/mapbox/satellite-v9">Satellite</option>
</select>
</div>
</div>
<script>
mapboxgl.accessToken = "%s";
const map = new mapboxgl.Map({
container: "map",
style: "mapbox://styles/mapbox/dark-v10",
center: [%f, %f],
zoom: %d,
pitch: 60,
bearing: -60
});
let data = %s;
let h3Resolution = %d;
let maxHeight = %d;
function updateMap() {
const hexagons = {};
data.forEach(point => {
const hexId = h3.latLngToCell(point.lat, point.lon, h3Resolution);
if (hexagons[hexId]) {
hexagons[hexId].value += point.value;
hexagons[hexId].count += 1;
} else {
hexagons[hexId] = { value: point.value, count: 1 };
}
});
const features = Object.entries(hexagons).map(([hexId, data]) => {
const boundary = h3.cellToBoundary(hexId);
const avgValue = data.value / data.count;
return {
type: "Feature",
properties: {
value: avgValue,
height: avgValue,
hexId: hexId
},
geometry: {
type: "Polygon",
coordinates: [boundary.map(([lat, lng]) => [lng, lat])]
}
};
});
const maxValue = Math.max(...features.map(f => f.properties.value));
features.forEach(f => {
f.properties.height = (f.properties.value / maxValue) * maxHeight;
});
const colorScale = d3.scaleSequential(d3.%s).domain([0, maxValue]);
if (map.getSource("hexagons")) {
map.getSource("hexagons").setData({ type: "FeatureCollection", features: features });
} else {
map.addSource("hexagons", {
type: "geojson",
data: { type: "FeatureCollection", features: features }
});
map.addLayer({
id: "hexagons",
type: "fill-extrusion",
source: "hexagons",
paint: {
"fill-extrusion-color": [
"interpolate",
["linear"],
["get", "value"],
0, colorScale(0),
maxValue, colorScale(maxValue)
],
"fill-extrusion-height": ["get", "height"],
"fill-extrusion-base": 0,
"fill-extrusion-opacity": 0.8
}
});
map.on("click", "hexagons", (e) => {
new mapboxgl.Popup()
.setLngLat(e.lngLat)
.setHTML(`<strong>Value:</strong> ${e.features[0].properties.value.toLocaleString()}`)
.addTo(map);
});
map.on("mouseenter", "hexagons", () => {
map.getCanvas().style.cursor = "pointer";
});
map.on("mouseleave", "hexagons", () => {
map.getCanvas().style.cursor = "";
});
}
}
document.getElementById("heightSlider").addEventListener("input", (event) => {
maxHeight = event.target.value;
document.getElementById("heightValue").innerText = maxHeight;
updateMap();
});
document.getElementById("resolutionSlider").addEventListener("input", (event) => {
h3Resolution = event.target.value;
document.getElementById("resolutionValue").innerText = h3Resolution;
updateMap();
});
document.getElementById("layerSelect").addEventListener("change", (event) => {
map.setStyle(event.target.value);
});
map.on("load", updateMap);
map.addControl(new mapboxgl.NavigationControl());
</script>
</body>
</html>',
value_col, max_height, max_height, h3_resolution, h3_resolution, mapbox_token, map_center[1], map_center[2], map_zoom, data_json, h3_resolution, max_height, color_palette)
writeLines(html_content, output_file)
message("Hexagon Map has been created: ", output_file)
# Automatically open the map in RStudio Viewer if available
if (rstudioapi::isAvailable()) {
rstudioapi::viewer(output_file)
} else if (interactive()) {
browseURL(output_file)
}
invisible(NULL)
}
map <- create_3D(index, "green_index","pk.eyJ1Ijoic2FjaGl0Mjc5MCIsImEiOiJjbHhxMjRnNHIwdG1lMnJxcjV6cGluc3A1In0.NACDYBfi7PDrJgAvzImuVA", output_file = "zurich_green_index_map.html")
map <- create_3D(data= index, "green_index",mapbox_token="pk.eyJ1Ijoic2FjaGl0Mjc5MCIsImEiOiJjbHhxMjRnNHIwdG1lMnJxcjV6cGluc3A1In0.NACDYBfi7PDrJgAvzImuVA", output_file = "zurich_green_index_map.html")
devtools::check()
devtools::check(args = "--as-cran")
devtools::document()
devtools::check(args = "--as-cran")
devtools::document()
devtools::check(args = "--as-cran")
devtools::document()
devtools::check(args = "--as-cran")
devtools::document()
devtools::check(args = "--as-cran")
devtools::build()
data <- get_osm_data("Thalwil, Zurich")
index <- calculate_green_index(data, 2056)
green_areas_data <- data$green_areas
mapbox_token <- "pk.eyJ1Ijoic2FjaGl0Mjc5MCIsImEiOiJjbHhxMjRnNHIwdG1lMnJxcjV6cGluc3A1In0.NACDYBfi7PDrJgAvzImuVA"
accessibility_mapbox(green_areas_data, mapbox_token)
create_linestring_3D(index, "green_index", mapbox_token)
create_hexmap_3D(
data = index,
value_col = "green_index",
mapbox_token = mapbox_token,
output_file = "map.html",
color_palette = "interpolateViridis"
)
visualize_green_spaces(green_areas_data)
green_space_clustering(green_areas_data, num_clusters = 3)
map <- plot_green_index(index, interactive = TRUE, base_map = "CartoDB.DarkMatter")
# To view the plot in the console, use:
print(map)
library(greenR)
data <- get_osm_data("Basel, Switzerland")
green_index <- calculate_green_index(data, 2056, 100)
library(greenR)
data <- get_osm_data("Basel, Switzerland")
green_areas_data <- data$green_areas
accessibility_mapbox(green_areas_data, "pk.eyJ1Ijoic2FjaGl0Mjc5MCIsImEiOiJjbHhxMjRnNHIwdG1lMnJxcjV6cGluc3A1In0.NACDYBfi7PDrJgAvzImuVA")
index <- calculate_green_index(data, 2056, 100)
create_linestring_3D(index, "green_index", mapbox_token)
mapbox_token <- pk.eyJ1Ijoic2FjaGl0Mjc5MCIsImEiOiJjbHhxMjRnNHIwdG1lMnJxcjV6cGluc3A1In0.NACDYBfi7PDrJgAvzImuVA
mapbox_token <- "pk.eyJ1Ijoic2FjaGl0Mjc5MCIsImEiOiJjbHhxMjRnNHIwdG1lMnJxcjV6cGluc3A1In0.NACDYBfi7PDrJgAvzImuVA"
create_linestring_3D(index, "green_index", mapbox_token)
create_hexmap_3D(
data = green_index,
value_col = "index",
mapbox_token = mapbox_token,
output_file = "map.html",
color_palette = "interpolateViridis"
)
create_hexmap_3D(
data = index,
value_col = "green_index",
mapbox_token = mapbox_token,
output_file = "map.html",
color_palette = "interpolateViridis"
)
devtools::document()
devtools::check(args = "--as-cran")
devtools::document()
devtools::check(args = "--as-cran")
devtools::build()
devtools::document()
devtools::build_vignettes()
devtools::document()
devtools::build_vignettes()
devtools::document()
devtools::build_vignettes()
devtools:check(cran = TRUE)
devtools:check()
library(devtools)
devtools:check(cran = TRUE)
devtools::document()
devtools:check(cran = TRUE)
library(devtools)
check(cran = TRUE)
library(rhub)
rhub::check(platform = "debian-gcc-devel")
rc_new_token()
rc_submit()
rhubv2::check(platform = "debian-gcc-devel")
rhub::rhub_doctor()
pak::pkg_install("rhub")
rhub::rhub_platforms()
rhub::rhub_check()
rhub::check(platforms = c("fedora-gcc-devel", "ubuntu-clang-devel"))
?rhubv2
rc_submit()
library(rhub)
rc_submit()
rc_submit()
rhub::check_for_cran()
rc_submit()
check(cran = TRUE)
devtools::check(cran = TRUE)
devtools::check()
devtools::build()
devtools::submit_cran()
devtools::document()
devtools::check()
devtools::build()
devtools::submit_cran()
devtools::document()
devtools::check()
devtools::document()
devtools::load_all()
devtools::check()
devtools::document()
devtools::check()
devtools::build()
devtools::install()
library(devtools)
document()
build()
install()
library(greenR)
# Define a central point (let's use a point in Lausanne, Switzerland)
central_lat <- 46.5196
central_lon <- 6.6322
# Define the size of the area (let's say 2 km x 2 km)
km_offset <- 1 / 111  # Approximate conversion of 1 km to degrees
# Create the bounding box
bbox <- c(
central_lon - km_offset,
central_lat - km_offset,
central_lon + km_offset,
central_lat + km_offset
)
# Get OSM data using the bounding box
osm_data <- get_osm_data(bbox)
# Define a central point (let's use a point in Lausanne, Switzerland)
central_lat <- 46.5196
central_lon <- 6.6322
# Define the size of the area (let's say 2 km x 2 km)
km_offset <- 1 / 111  # Approximate conversion of 1 km to degrees
# Create the bounding box
bbox <- c(
central_lon - km_offset,
central_lat - km_offset,
central_lon + km_offset,
central_lat + km_offset
)
osm_data <- get_osm_data(bbox)
result <- accessibility_greenspace(
green_area_data = osm_data$green_areas,
location_lat = central_lat,
location_lon = central_lon,
max_walk_time = 10,  # Let's set this to 10 minutes for a smaller area
output_file = "/Users/smahajan/Downloads/lausanne_small_area.gpkg"
)
# View the leaflet map
result$map
check()
library(devtools)
check()