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Quarto GHA Workflow Runner committed Feb 25, 2024
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2 changes: 1 addition & 1 deletion .nojekyll
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12 changes: 6 additions & 6 deletions atlases.html
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Expand Up @@ -229,7 +229,7 @@ <h1 class="title">Atlases</h1>

<div class="quarto-listing quarto-listing-container-grid" id="listing-listing">
<div class="list grid quarto-listing-cols-3">
<div class="g-col-1" data-index="0" data-categories="Project-1,Project-2,Core-C,Core-D,2024" data-listing-date-sort="1704758400000" data-listing-file-modified-sort="1708801241606" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="1" data-listing-word-count-sort="178">
<div class="g-col-1" data-index="0" data-categories="Project-1,Project-2,Core-C,Core-D,2024" data-listing-date-sort="1704758400000" data-listing-file-modified-sort="1708848723380" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="1" data-listing-word-count-sort="178">
<a href="./atlases/2024-lucas-38194268/index.html" class="quarto-grid-link">
</a><div class="quarto-grid-item card h-100 card-left"><a href="./atlases/2024-lucas-38194268/index.html" class="quarto-grid-link">
<div class="listing-item-img-placeholder card-img-top" style="height: 150px;">&nbsp;</div>
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Chikungunya virus infection disrupts lymph node lymphatic endothelial cell composition and function via MARCO
</h5>
</a><div class="card-subtitle listing-subtitle"><a href="./atlases/2024-lucas-38194268/index.html" class="quarto-grid-link">
</a><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large">Atlas</a>
</a><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large"><i class="bi bi-compass"></i> Atlas</a>
</div>
<div class="listing-categories">
<div class="listing-category" onclick="window.quartoListingCategory('Project-1'); return false;">
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</div>

</div>
<div class="g-col-1" data-index="1" data-categories="Project-1,Project-2,Core-C,Core-D,2021" data-listing-date-sort="1636934400000" data-listing-file-modified-sort="1708801241606" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="203">
<div class="g-col-1" data-index="1" data-categories="Project-1,Project-2,Core-C,Core-D,2021" data-listing-date-sort="1636934400000" data-listing-file-modified-sort="1708848723380" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="203">
<a href="./atlases/2021-carpentier-34618370/index.html" class="quarto-grid-link">
</a><div class="quarto-grid-item card h-100 card-left"><a href="./atlases/2021-carpentier-34618370/index.html" class="quarto-grid-link">
<p class="card-img-top">
Expand All @@ -277,7 +277,7 @@ <h5 class="no-anchor card-title listing-title">
MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination
</h5>
</a><div class="card-subtitle listing-subtitle"><a href="./atlases/2021-carpentier-34618370/index.html" class="quarto-grid-link">
</a><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large">Atlas</a>
</a><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large"><i class="bi bi-compass"></i> Atlas</a>
</div>
<div class="listing-categories">
<div class="listing-category" onclick="window.quartoListingCategory('Project-1'); return false;">
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</div>

</div>
<div class="g-col-1" data-index="2" data-categories="Project-2,Core-C,Core-D,2021" data-listing-date-sort="1618185600000" data-listing-file-modified-sort="1708801241606" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="1" data-listing-word-count-sort="169">
<div class="g-col-1" data-index="2" data-categories="Project-2,Core-C,Core-D,2021" data-listing-date-sort="1618185600000" data-listing-file-modified-sort="1708848723380" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="1" data-listing-word-count-sort="169">
<a href="./atlases/2021-walsh-33843587/index.html" class="quarto-grid-link">
</a><div class="quarto-grid-item card h-100 card-left"><a href="./atlases/2021-walsh-33843587/index.html" class="quarto-grid-link">
<p class="card-img-top">
Expand All @@ -316,7 +316,7 @@ <h5 class="no-anchor card-title listing-title">
Molecular tracking devices quantify antigen distribution and archiving in the murine lymph node
</h5>
</a><div class="card-subtitle listing-subtitle"><a href="./atlases/2021-walsh-33843587/index.html" class="quarto-grid-link">
</a><a href="https://d3898ys7yh3545.cloudfront.net/" class="link-box-large">Atlas</a>
</a><a href="https://d3898ys7yh3545.cloudfront.net/" class="link-box-large"><i class="bi bi-compass"></i> Atlas</a>
</div>
<div class="listing-categories">
<div class="listing-category" onclick="window.quartoListingCategory('Project-2'); return false;">
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2 changes: 1 addition & 1 deletion atlases/2021-carpentier-34618370/index.html
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<header id="title-block-header" class="quarto-title-block default">
<div class="quarto-title">
<h1 class="title">MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination</h1>
<p class="subtitle lead"><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large">Atlas</a></p>
<p class="subtitle lead"><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large"><i class="bi bi-compass"></i> Atlas</a></p>
<div class="quarto-categories">
<div class="quarto-category">Project-1</div>
<div class="quarto-category">Project-2</div>
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2 changes: 1 addition & 1 deletion atlases/2021-walsh-33843587/index.html
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<header id="title-block-header" class="quarto-title-block default">
<div class="quarto-title">
<h1 class="title">Molecular tracking devices quantify antigen distribution and archiving in the murine lymph node</h1>
<p class="subtitle lead"><a href="https://d3898ys7yh3545.cloudfront.net/" class="link-box-large">Atlas</a></p>
<p class="subtitle lead"><a href="https://d3898ys7yh3545.cloudfront.net/" class="link-box-large"><i class="bi bi-compass"></i> Atlas</a></p>
<div class="quarto-categories">
<div class="quarto-category">Project-2</div>
<div class="quarto-category">Core-C</div>
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2 changes: 1 addition & 1 deletion atlases/2024-lucas-38194268/index.html
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<header id="title-block-header" class="quarto-title-block default">
<div class="quarto-title">
<h1 class="title">Chikungunya virus infection disrupts lymph node lymphatic endothelial cell composition and function via MARCO</h1>
<p class="subtitle lead"><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large">Atlas</a></p>
<p class="subtitle lead"><a href="https://morrison-lnsc-browser.s3.amazonaws.com/index.html" class="link-box-large"><i class="bi bi-compass"></i> Atlas</a></p>
<div class="quarto-categories">
<div class="quarto-category">Project-1</div>
<div class="quarto-category">Project-2</div>
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30 changes: 15 additions & 15 deletions index.html
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<section id="projects" class="level2">
<h2 class="anchored" data-anchor-id="projects">Projects</h2>
<ul>
<li><p><a href="./projects.html#define-protective-and-pathogenic-roles-of-lnscs-during-viral-inf" class="link-bold">Define protective and pathogenic roles of LNSCs during viral infection</a><br>
<a href="./investigators.html#thomas-morrison-phd" class="link-box-bw">Thomas Morrison, PhD</a> <a href="./pubs.html#category=Project-1" class="link-box-bw">Publications</a> <a href="./atlases.html#category=Project-1" class="link-box-bw">Atlases</a><br>
Project 1 will define how viral targeting of distinct LNSCs regulates viral dissemination, LN organization and inflammation, and development of adaptive immunity</p></li>
<li><p><a href="./projects.html#identify-mechanisms-of-vaccine-antigen-localization-and-retentio" class="link-bold">Identify mechanisms of vaccine antigen localization and retention by LNSCs that drive and enhance cellular and humoral immunity</a><br>
<a href="./investigators.html#beth-tamburini-phd" class="link-box-bw">Beth Tamburini, PhD</a> <a href="./pubs.html#category=Project-2" class="link-box-bw">Publications</a> <a href="./atlases.html#category=Project-2" class="link-box-bw">Atlases</a><br>
Project 2 will define mechanisms of vaccine antigen acquisition and retention by different LNSCs</p></li>
<li><p><a href="./projects.html#investigate-the-role-of-immune-complexes-in-antigen-acquisition" class="link-bold">Investigate the role of immune complexes in antigen acquisition and retention by LNSCs to modulate cellular and humoral immunity</a><br>
<li><p><a href="./projects.html#define-protective-and-pathogenic-roles-o" class="link-bold">Define protective and pathogenic roles of LNSCs during viral infection</a><br>
<a href="./investigators.html#thomas-morrison-phd" class="link-box-bw">Thomas Morrison, PhD</a> <a href="./pubs.html#category=Project-1" class="link-box-bw"><i class="bi bi-file-earmark"></i> Publications</a> <a href="./atlases.html#category=Project-1" class="link-box-bw"><i class="bi bi-compass"></i> Atlases</a><br>
<span class="text-bold">Project 1</span> will define how viral targeting of distinct LNSCs regulates viral dissemination, LN organization and inflammation, and development of adaptive immunity</p></li>
<li><p><a href="./projects.html#identify-mechanisms-of-vaccine-antigen-l" class="link-bold">Identify mechanisms of vaccine antigen localization and retention by LNSCs that drive and enhance cellular and humoral immunity</a><br>
<a href="./investigators.html#beth-tamburini-phd" class="link-box-bw">Beth Tamburini, PhD</a> <a href="./pubs.html#category=Project-2" class="link-box-bw"><i class="bi bi-file-earmark"></i> Publications</a> <a href="./atlases.html#category=Project-2" class="link-box-bw"><i class="bi bi-compass"></i> Atlases</a><br>
<span class="text-bold">Project 2</span> will define mechanisms of vaccine antigen acquisition and retention by different LNSCs</p></li>
<li><p><a href="./projects.html#investigate-the-role-of-immune-complexes" class="link-bold">Investigate the role of immune complexes in antigen acquisition and retention by LNSCs to modulate cellular and humoral immunity</a><br>
<a href="./investigators.html#jenna-guthmiller-phd" class="link-box-bw">Jenna Guthmiller, PhD</a><br>
Project 3 will use stabilized DNA conjugates to track antibody:antigen complexes to determine the spatial and cellular localization of immune complexes</p></li>
<span class="text-bold">Project 3</span> will use stabilized DNA conjugates to track antibody:antigen complexes to determine the spatial and cellular localization of immune complexes</p></li>
</ul>
</section>
<section id="cores" class="level2">
<h2 class="anchored" data-anchor-id="cores">Cores</h2>
<ul>
<li><p><a href="./projects.html#mouse-transgenics-and-tissue-characterization" class="link-bold">Mouse transgenics and tissue characterization</a><br>
<a href="./investigators.html#jennifer-matsuda-phd" class="link-box-bw">Jennifer Matsuda, PhD</a> <a href="./pubs.html#category=Core-B" class="link-box-bw">Publications</a><br>
The goal of the animal and tissue core is to generate novel genetic mouse models and to develop a tissue and cell repository</p></li>
<li><p><a href="./projects.html#mouse-transgenics-and-tissue-characteriz" class="link-bold">Mouse transgenics and tissue characterization</a><br>
<a href="./investigators.html#jennifer-matsuda-phd" class="link-box-bw">Jennifer Matsuda, PhD</a> <a href="./pubs.html#category=Core-B" class="link-box-bw"><i class="bi bi-file-earmark"></i> Publications</a><br>
<span class="text-bold">Core B</span> will generate novel genetic mouse models and develop a tissue and cell repository</p></li>
<li><p><a href="./projects.html#molecular-technologies" class="link-bold">Molecular technologies</a><br>
<a href="./investigators.html#jay-hesselberth-phd" class="link-box-bw">Jay Hesselberth, PhD</a> <a href="./pubs.html#category=Core-C" class="link-box-bw">Publications</a> <a href="./atlases.html#category=Core-C" class="link-box-bw">Atlases</a><br>
The molecular technologies core will apply new molecular tools to understand the contributions of lymph node stromal cells to immune responses</p></li>
<a href="./investigators.html#jay-hesselberth-phd" class="link-box-bw">Jay Hesselberth, PhD</a> <a href="./pubs.html#category=Core-C" class="link-box-bw"><i class="bi bi-file-earmark"></i> Publications</a> <a href="./atlases.html#category=Core-C" class="link-box-bw"><i class="bi bi-compass"></i> Atlases</a><br>
<span class="text-bold">Core C</span> will apply new molecular tools to understand the contributions of lymph node stromal cells to immune responses</p></li>
<li><p><a href="./projects.html#bioinformatics" class="link-bold">Bioinformatics</a><br>
<a href="./investigators.html#jay-hesselberth-phd" class="link-box-bw">Jay Hesselberth, PhD</a> <a href="./investigators.html#ryan-sheridan-phd" class="link-box-bw">Ryan Sheridan, PhD</a> <a href="./pubs.html#category=Core-D" class="link-box-bw">Publications</a> <a href="./atlases.html#category=Core-D" class="link-box-bw">Atlases</a><br>
The bioinformatics core will apply new informatics approaches to understand the contributions of lymph node stromal cells (LN SC) to immune responses</p></li>
<a href="./investigators.html#jay-hesselberth-phd" class="link-box-bw">Jay Hesselberth, PhD</a> <a href="./investigators.html#ryan-sheridan-phd" class="link-box-bw">Ryan Sheridan, PhD</a> <a href="./pubs.html#category=Core-D" class="link-box-bw"><i class="bi bi-file-earmark"></i> Publications</a> <a href="./atlases.html#category=Core-D" class="link-box-bw"><i class="bi bi-compass"></i> Atlases</a><br>
<span class="text-bold">Core D</span> will apply new informatics approaches to understand the contributions of LNSCs to immune responses</p></li>
</ul>


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