diff --git a/examples/simultaneous.ipynb b/examples/simultaneous.ipynb deleted file mode 100644 index 887d030..0000000 --- a/examples/simultaneous.ipynb +++ /dev/null @@ -1,263 +0,0 @@ -{ - "cells": [ - { - "cell_type": "code", - "execution_count": 1, - "metadata": {}, - "outputs": [], - "source": [ - "import os\n", - "import time\n", - "import torch\n", - "\n", - "import matplotlib.pyplot as plt\n", - "import numpy as np\n", - "from scipy.io import loadmat\n", - "\n", - "from sparsecoding.data.transforms.patch import sample_random_patches\n", - "from sparsecoding import inference\n", - "\n", - "from sparsecoding import models\n", - "from sparsecoding.visualization import plot_dictionary" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "### Define constants and load data" - ] - }, - { - "cell_type": "code", - "execution_count": 8, - "metadata": {}, - "outputs": [], - "source": [ - "# your path here\n", - "img_dir = os.path.join(os.environ['DATA_PATH'],'data','IMAGES.mat')\n", - "\n", - "images = loadmat(img_dir)['IMAGES']\n", - "images = torch.tensor(images).permute([2,0,1]).unsqueeze(1)\n", - "images = images.type(torch.float32)\n", - "n_images = images.shape[-1]\n", - "n_patches = 100\n", - "patch_size = 16\n", - "patches = sample_random_patches(image=images, patch_size=patch_size, num_patches=n_patches)\n", - "data = patches.reshape([n_patches, -1])\n", - "\n", - "n_samples, n_features = data.shape" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "### Visualize patches" - ] - }, - { - "cell_type": "code", - "execution_count": 9, - "metadata": { - "scrolled": false - }, - "outputs": [ - { - "data": { - "application/javascript": "/* Put everything inside the global mpl namespace */\n/* global mpl */\nwindow.mpl = {};\n\nmpl.get_websocket_type = function () {\n if (typeof WebSocket !== 'undefined') {\n return WebSocket;\n } else if (typeof MozWebSocket !== 'undefined') {\n return MozWebSocket;\n } else {\n alert(\n 'Your browser does not have WebSocket support. ' +\n 'Please try Chrome, Safari or Firefox ≥ 6. ' +\n 'Firefox 4 and 5 are also supported but you ' +\n 'have to enable WebSockets in about:config.'\n );\n }\n};\n\nmpl.figure = function (figure_id, websocket, ondownload, parent_element) {\n this.id = figure_id;\n\n this.ws = websocket;\n\n this.supports_binary = this.ws.binaryType !== undefined;\n\n if (!this.supports_binary) {\n var warnings = document.getElementById('mpl-warnings');\n if (warnings) {\n warnings.style.display = 'block';\n warnings.textContent =\n 'This browser does not support binary websocket messages. ' +\n 'Performance may be slow.';\n }\n }\n\n this.imageObj = new Image();\n\n this.context = undefined;\n this.message = undefined;\n this.canvas = undefined;\n this.rubberband_canvas = undefined;\n this.rubberband_context = undefined;\n this.format_dropdown = undefined;\n\n this.image_mode = 'full';\n\n this.root = document.createElement('div');\n this.root.setAttribute('style', 'display: inline-block');\n this._root_extra_style(this.root);\n\n parent_element.appendChild(this.root);\n\n this._init_header(this);\n this._init_canvas(this);\n this._init_toolbar(this);\n\n var fig = this;\n\n this.waiting = false;\n\n this.ws.onopen = function () {\n fig.send_message('supports_binary', { value: fig.supports_binary });\n fig.send_message('send_image_mode', {});\n if (mpl.ratio !== 1) {\n fig.send_message('set_dpi_ratio', { dpi_ratio: mpl.ratio });\n }\n fig.send_message('refresh', {});\n };\n\n this.imageObj.onload = function () {\n if (fig.image_mode === 'full') {\n // Full images could contain transparency (where diff images\n // almost always do), so we need to clear the canvas so that\n // there is no ghosting.\n fig.context.clearRect(0, 0, fig.canvas.width, fig.canvas.height);\n }\n fig.context.drawImage(fig.imageObj, 0, 0);\n };\n\n this.imageObj.onunload = function () {\n fig.ws.close();\n };\n\n this.ws.onmessage = this._make_on_message_function(this);\n\n this.ondownload = ondownload;\n};\n\nmpl.figure.prototype._init_header = function () {\n var titlebar = document.createElement('div');\n titlebar.classList =\n 'ui-dialog-titlebar ui-widget-header ui-corner-all ui-helper-clearfix';\n var titletext = document.createElement('div');\n titletext.classList = 'ui-dialog-title';\n titletext.setAttribute(\n 'style',\n 'width: 100%; text-align: center; padding: 3px;'\n );\n titlebar.appendChild(titletext);\n this.root.appendChild(titlebar);\n this.header = titletext;\n};\n\nmpl.figure.prototype._canvas_extra_style = function (_canvas_div) {};\n\nmpl.figure.prototype._root_extra_style = function (_canvas_div) {};\n\nmpl.figure.prototype._init_canvas = function () {\n var fig = this;\n\n var canvas_div = (this.canvas_div = document.createElement('div'));\n canvas_div.setAttribute(\n 'style',\n 'border: 1px solid #ddd;' +\n 'box-sizing: content-box;' +\n 'clear: both;' +\n 'min-height: 1px;' +\n 'min-width: 1px;' +\n 'outline: 0;' +\n 'overflow: hidden;' +\n 'position: relative;' +\n 'resize: both;'\n );\n\n function on_keyboard_event_closure(name) {\n return function (event) {\n return fig.key_event(event, name);\n };\n }\n\n canvas_div.addEventListener(\n 'keydown',\n on_keyboard_event_closure('key_press')\n );\n canvas_div.addEventListener(\n 'keyup',\n on_keyboard_event_closure('key_release')\n );\n\n this._canvas_extra_style(canvas_div);\n this.root.appendChild(canvas_div);\n\n var canvas = (this.canvas = document.createElement('canvas'));\n canvas.classList.add('mpl-canvas');\n canvas.setAttribute('style', 'box-sizing: content-box;');\n\n this.context = canvas.getContext('2d');\n\n var backingStore =\n this.context.backingStorePixelRatio ||\n this.context.webkitBackingStorePixelRatio ||\n this.context.mozBackingStorePixelRatio ||\n this.context.msBackingStorePixelRatio ||\n this.context.oBackingStorePixelRatio ||\n this.context.backingStorePixelRatio ||\n 1;\n\n mpl.ratio = (window.devicePixelRatio || 1) / backingStore;\n\n var rubberband_canvas = (this.rubberband_canvas = document.createElement(\n 'canvas'\n ));\n rubberband_canvas.setAttribute(\n 'style',\n 'box-sizing: content-box; position: absolute; left: 0; top: 0; z-index: 1;'\n );\n\n var resizeObserver = new ResizeObserver(function (entries) {\n var nentries = entries.length;\n for (var i = 0; i < nentries; i++) {\n var entry = entries[i];\n var width, height;\n if (entry.contentBoxSize) {\n width = entry.contentBoxSize.inlineSize;\n height = entry.contentBoxSize.blockSize;\n } else {\n width = entry.contentRect.width;\n height = entry.contentRect.height;\n }\n\n // Keep the size of the canvas and rubber band canvas in sync with\n // the canvas container.\n canvas.setAttribute('width', width * mpl.ratio);\n canvas.setAttribute('height', height * mpl.ratio);\n canvas.setAttribute(\n 'style',\n 'width: ' + width + 'px; height: ' + height + 'px;'\n );\n\n rubberband_canvas.setAttribute('width', width);\n rubberband_canvas.setAttribute('height', height);\n\n // And update the size in Python. We ignore the initial 0/0 size\n // that occurs as the element is placed into the DOM, which should\n // otherwise not happen due to the minimum size styling.\n if (width != 0 && height != 0) {\n fig.request_resize(width, height);\n }\n }\n });\n resizeObserver.observe(canvas_div);\n\n function on_mouse_event_closure(name) {\n return function (event) {\n return fig.mouse_event(event, name);\n };\n }\n\n rubberband_canvas.addEventListener(\n 'mousedown',\n on_mouse_event_closure('button_press')\n );\n rubberband_canvas.addEventListener(\n 'mouseup',\n on_mouse_event_closure('button_release')\n );\n // Throttle sequential mouse events to 1 every 20ms.\n rubberband_canvas.addEventListener(\n 'mousemove',\n on_mouse_event_closure('motion_notify')\n );\n\n rubberband_canvas.addEventListener(\n 'mouseenter',\n on_mouse_event_closure('figure_enter')\n );\n rubberband_canvas.addEventListener(\n 'mouseleave',\n on_mouse_event_closure('figure_leave')\n );\n\n canvas_div.addEventListener('wheel', function (event) {\n if (event.deltaY < 0) {\n event.step = 1;\n } else {\n event.step = -1;\n }\n on_mouse_event_closure('scroll')(event);\n });\n\n canvas_div.appendChild(canvas);\n canvas_div.appendChild(rubberband_canvas);\n\n this.rubberband_context = rubberband_canvas.getContext('2d');\n this.rubberband_context.strokeStyle = '#000000';\n\n this._resize_canvas = function (width, height, forward) {\n if (forward) {\n canvas_div.style.width = width + 'px';\n canvas_div.style.height = height + 'px';\n }\n };\n\n // Disable right mouse context menu.\n this.rubberband_canvas.addEventListener('contextmenu', function (_e) {\n return false;\n });\n\n function set_focus() {\n canvas.focus();\n canvas_div.focus();\n }\n\n window.setTimeout(set_focus, 100);\n};\n\nmpl.figure.prototype._init_toolbar = function () {\n var fig = this;\n\n var toolbar = document.createElement('div');\n toolbar.classList = 'mpl-toolbar';\n this.root.appendChild(toolbar);\n\n function on_click_closure(name) {\n return function (_event) {\n return fig.toolbar_button_onclick(name);\n };\n }\n\n function on_mouseover_closure(tooltip) {\n return function (event) {\n if (!event.currentTarget.disabled) {\n return fig.toolbar_button_onmouseover(tooltip);\n }\n };\n }\n\n fig.buttons = {};\n var buttonGroup = document.createElement('div');\n buttonGroup.classList = 'mpl-button-group';\n for (var toolbar_ind in mpl.toolbar_items) {\n var name = mpl.toolbar_items[toolbar_ind][0];\n var tooltip = mpl.toolbar_items[toolbar_ind][1];\n var image = mpl.toolbar_items[toolbar_ind][2];\n var method_name = mpl.toolbar_items[toolbar_ind][3];\n\n if (!name) {\n /* Instead of a spacer, we start a new button group. */\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n buttonGroup = document.createElement('div');\n buttonGroup.classList = 'mpl-button-group';\n continue;\n }\n\n var button = (fig.buttons[name] = document.createElement('button'));\n button.classList = 'mpl-widget';\n button.setAttribute('role', 'button');\n button.setAttribute('aria-disabled', 'false');\n button.addEventListener('click', on_click_closure(method_name));\n button.addEventListener('mouseover', on_mouseover_closure(tooltip));\n\n var icon_img = document.createElement('img');\n icon_img.src = '_images/' + image + '.png';\n icon_img.srcset = '_images/' + image + '_large.png 2x';\n icon_img.alt = tooltip;\n button.appendChild(icon_img);\n\n buttonGroup.appendChild(button);\n }\n\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n\n var fmt_picker = document.createElement('select');\n fmt_picker.classList = 'mpl-widget';\n toolbar.appendChild(fmt_picker);\n this.format_dropdown = fmt_picker;\n\n for (var ind in mpl.extensions) {\n var fmt = mpl.extensions[ind];\n var option = document.createElement('option');\n option.selected = fmt === mpl.default_extension;\n option.innerHTML = fmt;\n fmt_picker.appendChild(option);\n }\n\n var status_bar = document.createElement('span');\n status_bar.classList = 'mpl-message';\n toolbar.appendChild(status_bar);\n this.message = status_bar;\n};\n\nmpl.figure.prototype.request_resize = function (x_pixels, y_pixels) {\n // Request matplotlib to resize the figure. Matplotlib will then trigger a resize in the client,\n // which will in turn request a refresh of the image.\n this.send_message('resize', { width: x_pixels, height: y_pixels });\n};\n\nmpl.figure.prototype.send_message = function (type, properties) {\n properties['type'] = type;\n properties['figure_id'] = this.id;\n this.ws.send(JSON.stringify(properties));\n};\n\nmpl.figure.prototype.send_draw_message = function () {\n if (!this.waiting) {\n this.waiting = true;\n this.ws.send(JSON.stringify({ type: 'draw', figure_id: this.id }));\n }\n};\n\nmpl.figure.prototype.handle_save = function (fig, _msg) {\n var format_dropdown = fig.format_dropdown;\n var format = format_dropdown.options[format_dropdown.selectedIndex].value;\n fig.ondownload(fig, format);\n};\n\nmpl.figure.prototype.handle_resize = function (fig, msg) {\n var size = msg['size'];\n if (size[0] !== fig.canvas.width || size[1] !== fig.canvas.height) {\n fig._resize_canvas(size[0], size[1], msg['forward']);\n fig.send_message('refresh', {});\n }\n};\n\nmpl.figure.prototype.handle_rubberband = function (fig, msg) {\n var x0 = msg['x0'] / mpl.ratio;\n var y0 = (fig.canvas.height - msg['y0']) / mpl.ratio;\n var x1 = msg['x1'] / mpl.ratio;\n var y1 = (fig.canvas.height - msg['y1']) / mpl.ratio;\n x0 = Math.floor(x0) + 0.5;\n y0 = Math.floor(y0) + 0.5;\n x1 = Math.floor(x1) + 0.5;\n y1 = Math.floor(y1) + 0.5;\n var min_x = Math.min(x0, x1);\n var min_y = Math.min(y0, y1);\n var width = Math.abs(x1 - x0);\n var height = Math.abs(y1 - y0);\n\n fig.rubberband_context.clearRect(\n 0,\n 0,\n fig.canvas.width / mpl.ratio,\n fig.canvas.height / mpl.ratio\n );\n\n fig.rubberband_context.strokeRect(min_x, min_y, width, height);\n};\n\nmpl.figure.prototype.handle_figure_label = function (fig, msg) {\n // Updates the figure title.\n fig.header.textContent = msg['label'];\n};\n\nmpl.figure.prototype.handle_cursor = function (fig, msg) {\n var cursor = msg['cursor'];\n switch (cursor) {\n case 0:\n cursor = 'pointer';\n break;\n case 1:\n cursor = 'default';\n break;\n case 2:\n cursor = 'crosshair';\n break;\n case 3:\n cursor = 'move';\n break;\n }\n fig.rubberband_canvas.style.cursor = cursor;\n};\n\nmpl.figure.prototype.handle_message = function (fig, msg) {\n fig.message.textContent = msg['message'];\n};\n\nmpl.figure.prototype.handle_draw = function (fig, _msg) {\n // Request the server to send over a new figure.\n fig.send_draw_message();\n};\n\nmpl.figure.prototype.handle_image_mode = function (fig, msg) {\n fig.image_mode = msg['mode'];\n};\n\nmpl.figure.prototype.handle_history_buttons = function (fig, msg) {\n for (var key in msg) {\n if (!(key in fig.buttons)) {\n continue;\n }\n fig.buttons[key].disabled = !msg[key];\n fig.buttons[key].setAttribute('aria-disabled', !msg[key]);\n }\n};\n\nmpl.figure.prototype.handle_navigate_mode = function (fig, msg) {\n if (msg['mode'] === 'PAN') {\n fig.buttons['Pan'].classList.add('active');\n fig.buttons['Zoom'].classList.remove('active');\n } else if (msg['mode'] === 'ZOOM') {\n fig.buttons['Pan'].classList.remove('active');\n fig.buttons['Zoom'].classList.add('active');\n } else {\n fig.buttons['Pan'].classList.remove('active');\n fig.buttons['Zoom'].classList.remove('active');\n }\n};\n\nmpl.figure.prototype.updated_canvas_event = function () {\n // Called whenever the canvas gets updated.\n this.send_message('ack', {});\n};\n\n// A function to construct a web socket function for onmessage handling.\n// Called in the figure constructor.\nmpl.figure.prototype._make_on_message_function = function (fig) {\n return function socket_on_message(evt) {\n if (evt.data instanceof Blob) {\n /* FIXME: We get \"Resource interpreted as Image but\n * transferred with MIME type text/plain:\" errors on\n * Chrome. But how to set the MIME type? It doesn't seem\n * to be part of the websocket stream */\n evt.data.type = 'image/png';\n\n /* Free the memory for the previous frames */\n if (fig.imageObj.src) {\n (window.URL || window.webkitURL).revokeObjectURL(\n fig.imageObj.src\n );\n }\n\n fig.imageObj.src = (window.URL || window.webkitURL).createObjectURL(\n evt.data\n );\n fig.updated_canvas_event();\n fig.waiting = false;\n return;\n } else if (\n typeof evt.data === 'string' &&\n evt.data.slice(0, 21) === 'data:image/png;base64'\n ) {\n fig.imageObj.src = evt.data;\n fig.updated_canvas_event();\n fig.waiting = false;\n return;\n }\n\n var msg = JSON.parse(evt.data);\n var msg_type = msg['type'];\n\n // Call the \"handle_{type}\" callback, which takes\n // the figure and JSON message as its only arguments.\n try {\n var callback = fig['handle_' + msg_type];\n } catch (e) {\n console.log(\n \"No handler for the '\" + msg_type + \"' message type: \",\n msg\n );\n return;\n }\n\n if (callback) {\n try {\n // console.log(\"Handling '\" + msg_type + \"' message: \", msg);\n callback(fig, msg);\n } catch (e) {\n console.log(\n \"Exception inside the 'handler_\" + msg_type + \"' callback:\",\n e,\n e.stack,\n msg\n );\n }\n }\n };\n};\n\n// from http://stackoverflow.com/questions/1114465/getting-mouse-location-in-canvas\nmpl.findpos = function (e) {\n //this section is from http://www.quirksmode.org/js/events_properties.html\n var targ;\n if (!e) {\n e = window.event;\n }\n if (e.target) {\n targ = e.target;\n } else if (e.srcElement) {\n targ = e.srcElement;\n }\n if (targ.nodeType === 3) {\n // defeat Safari bug\n targ = targ.parentNode;\n }\n\n // pageX,Y are the mouse positions relative to the document\n var boundingRect = targ.getBoundingClientRect();\n var x = e.pageX - (boundingRect.left + document.body.scrollLeft);\n var y = e.pageY - (boundingRect.top + document.body.scrollTop);\n\n return { x: x, y: y };\n};\n\n/*\n * return a copy of an object with only non-object keys\n * we need this to avoid circular references\n * http://stackoverflow.com/a/24161582/3208463\n */\nfunction simpleKeys(original) {\n return Object.keys(original).reduce(function (obj, key) {\n if (typeof original[key] !== 'object') {\n obj[key] = original[key];\n }\n return obj;\n }, {});\n}\n\nmpl.figure.prototype.mouse_event = function (event, name) {\n var canvas_pos = mpl.findpos(event);\n\n if (name === 'button_press') {\n this.canvas.focus();\n this.canvas_div.focus();\n }\n\n var x = canvas_pos.x * mpl.ratio;\n var y = canvas_pos.y * mpl.ratio;\n\n this.send_message(name, {\n x: x,\n y: y,\n button: event.button,\n step: event.step,\n guiEvent: simpleKeys(event),\n });\n\n /* This prevents the web browser from automatically changing to\n * the text insertion cursor when the button is pressed. We want\n * to control all of the cursor setting manually through the\n * 'cursor' event from matplotlib */\n event.preventDefault();\n return false;\n};\n\nmpl.figure.prototype._key_event_extra = function (_event, _name) {\n // Handle any extra behaviour associated with a key event\n};\n\nmpl.figure.prototype.key_event = function (event, name) {\n // Prevent repeat events\n if (name === 'key_press') {\n if (event.which === this._key) {\n return;\n } else {\n this._key = event.which;\n }\n }\n if (name === 'key_release') {\n this._key = null;\n }\n\n var value = '';\n if (event.ctrlKey && event.which !== 17) {\n value += 'ctrl+';\n }\n if (event.altKey && event.which !== 18) {\n value += 'alt+';\n }\n if (event.shiftKey && event.which !== 16) {\n value += 'shift+';\n }\n\n value += 'k';\n value += event.which.toString();\n\n this._key_event_extra(event, name);\n\n this.send_message(name, { key: value, guiEvent: simpleKeys(event) });\n return false;\n};\n\nmpl.figure.prototype.toolbar_button_onclick = function (name) {\n if (name === 'download') {\n this.handle_save(this, null);\n } else {\n this.send_message('toolbar_button', { name: name });\n }\n};\n\nmpl.figure.prototype.toolbar_button_onmouseover = function (tooltip) {\n this.message.textContent = tooltip;\n};\nmpl.toolbar_items = [[\"Home\", \"Reset original view\", \"fa fa-home icon-home\", \"home\"], [\"Back\", \"Back to previous view\", \"fa fa-arrow-left icon-arrow-left\", \"back\"], [\"Forward\", \"Forward to next view\", \"fa fa-arrow-right icon-arrow-right\", \"forward\"], [\"\", \"\", \"\", \"\"], [\"Pan\", \"Left button pans, Right button zooms\\nx/y fixes axis, CTRL fixes aspect\", \"fa fa-arrows icon-move\", \"pan\"], [\"Zoom\", \"Zoom to rectangle\\nx/y fixes axis, CTRL fixes aspect\", \"fa fa-square-o icon-check-empty\", \"zoom\"], [\"\", \"\", \"\", \"\"], [\"Download\", \"Download plot\", \"fa fa-floppy-o icon-save\", \"download\"]];\n\nmpl.extensions = [\"eps\", \"jpeg\", \"pdf\", \"png\", \"ps\", \"raw\", \"svg\", \"tif\"];\n\nmpl.default_extension = \"png\";/* global mpl */\n\nvar comm_websocket_adapter = function (comm) {\n // Create a \"websocket\"-like object which calls the given IPython comm\n // object with the appropriate methods. Currently this is a non binary\n // socket, so there is still some room for performance tuning.\n var ws = {};\n\n ws.close = function () {\n comm.close();\n };\n ws.send = function (m) {\n //console.log('sending', m);\n comm.send(m);\n };\n // Register the callback with on_msg.\n comm.on_msg(function (msg) {\n //console.log('receiving', msg['content']['data'], msg);\n // Pass the mpl event to the overridden (by mpl) onmessage function.\n ws.onmessage(msg['content']['data']);\n });\n return ws;\n};\n\nmpl.mpl_figure_comm = function (comm, msg) {\n // This is the function which gets called when the mpl process\n // starts-up an IPython Comm through the \"matplotlib\" channel.\n\n var id = msg.content.data.id;\n // Get hold of the div created by the display call when the Comm\n // socket was opened in Python.\n var element = document.getElementById(id);\n var ws_proxy = comm_websocket_adapter(comm);\n\n function ondownload(figure, _format) {\n window.open(figure.canvas.toDataURL());\n }\n\n var fig = new mpl.figure(id, ws_proxy, ondownload, element);\n\n // Call onopen now - mpl needs it, as it is assuming we've passed it a real\n // web socket which is closed, not our websocket->open comm proxy.\n ws_proxy.onopen();\n\n fig.parent_element = element;\n fig.cell_info = mpl.find_output_cell(\"
\");\n if (!fig.cell_info) {\n console.error('Failed to find cell for figure', id, fig);\n return;\n }\n};\n\nmpl.figure.prototype.handle_close = function (fig, msg) {\n var width = fig.canvas.width / mpl.ratio;\n fig.root.removeEventListener('remove', this._remove_fig_handler);\n\n // Update the output cell to use the data from the current canvas.\n fig.push_to_output();\n var dataURL = fig.canvas.toDataURL();\n // Re-enable the keyboard manager in IPython - without this line, in FF,\n // the notebook keyboard shortcuts fail.\n IPython.keyboard_manager.enable();\n fig.parent_element.innerHTML =\n '';\n fig.close_ws(fig, msg);\n};\n\nmpl.figure.prototype.close_ws = function (fig, msg) {\n fig.send_message('closing', msg);\n // fig.ws.close()\n};\n\nmpl.figure.prototype.push_to_output = function (_remove_interactive) {\n // Turn the data on the canvas into data in the output cell.\n var width = this.canvas.width / mpl.ratio;\n var dataURL = this.canvas.toDataURL();\n this.cell_info[1]['text/html'] =\n '';\n};\n\nmpl.figure.prototype.updated_canvas_event = function () {\n // Tell IPython that the notebook contents must change.\n IPython.notebook.set_dirty(true);\n this.send_message('ack', {});\n var fig = this;\n // Wait a second, then push the new image to the DOM so\n // that it is saved nicely (might be nice to debounce this).\n setTimeout(function () {\n fig.push_to_output();\n }, 1000);\n};\n\nmpl.figure.prototype._init_toolbar = function () {\n var fig = this;\n\n var toolbar = document.createElement('div');\n toolbar.classList = 'btn-toolbar';\n this.root.appendChild(toolbar);\n\n function on_click_closure(name) {\n return function (_event) {\n return fig.toolbar_button_onclick(name);\n };\n }\n\n function on_mouseover_closure(tooltip) {\n return function (event) {\n if (!event.currentTarget.disabled) {\n return fig.toolbar_button_onmouseover(tooltip);\n }\n };\n }\n\n fig.buttons = {};\n var buttonGroup = document.createElement('div');\n buttonGroup.classList = 'btn-group';\n var button;\n for (var toolbar_ind in mpl.toolbar_items) {\n var name = mpl.toolbar_items[toolbar_ind][0];\n var tooltip = mpl.toolbar_items[toolbar_ind][1];\n var image = mpl.toolbar_items[toolbar_ind][2];\n var method_name = mpl.toolbar_items[toolbar_ind][3];\n\n if (!name) {\n /* Instead of a spacer, we start a new button group. */\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n buttonGroup = document.createElement('div');\n buttonGroup.classList = 'btn-group';\n continue;\n }\n\n button = fig.buttons[name] = document.createElement('button');\n button.classList = 'btn btn-default';\n button.href = '#';\n button.title = name;\n button.innerHTML = '';\n button.addEventListener('click', on_click_closure(method_name));\n button.addEventListener('mouseover', on_mouseover_closure(tooltip));\n buttonGroup.appendChild(button);\n }\n\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n\n // Add the status bar.\n var status_bar = document.createElement('span');\n status_bar.classList = 'mpl-message pull-right';\n toolbar.appendChild(status_bar);\n this.message = status_bar;\n\n // Add the close button to the window.\n var buttongrp = document.createElement('div');\n buttongrp.classList = 'btn-group inline pull-right';\n button = document.createElement('button');\n button.classList = 'btn btn-mini btn-primary';\n button.href = '#';\n button.title = 'Stop Interaction';\n button.innerHTML = '';\n button.addEventListener('click', function (_evt) {\n fig.handle_close(fig, {});\n });\n button.addEventListener(\n 'mouseover',\n on_mouseover_closure('Stop Interaction')\n );\n buttongrp.appendChild(button);\n var titlebar = this.root.querySelector('.ui-dialog-titlebar');\n titlebar.insertBefore(buttongrp, titlebar.firstChild);\n};\n\nmpl.figure.prototype._remove_fig_handler = function () {\n this.close_ws(this, {});\n};\n\nmpl.figure.prototype._root_extra_style = function (el) {\n el.style.boxSizing = 'content-box'; // override notebook setting of border-box.\n el.addEventListener('remove', this._remove_fig_handler);\n};\n\nmpl.figure.prototype._canvas_extra_style = function (el) {\n // this is important to make the div 'focusable\n el.setAttribute('tabindex', 0);\n // reach out to IPython and tell the keyboard manager to turn it's self\n // off when our div gets focus\n\n // location in version 3\n if (IPython.notebook.keyboard_manager) {\n IPython.notebook.keyboard_manager.register_events(el);\n } else {\n // location in version 2\n IPython.keyboard_manager.register_events(el);\n }\n};\n\nmpl.figure.prototype._key_event_extra = function (event, _name) {\n var manager = IPython.notebook.keyboard_manager;\n if (!manager) {\n manager = IPython.keyboard_manager;\n }\n\n // Check for shift+enter\n if (event.shiftKey && event.which === 13) {\n this.canvas_div.blur();\n // select the cell after this one\n var index = IPython.notebook.find_cell_index(this.cell_info[0]);\n IPython.notebook.select(index + 1);\n }\n};\n\nmpl.figure.prototype.handle_save = function (fig, _msg) {\n fig.ondownload(fig, null);\n};\n\nmpl.find_output_cell = function (html_output) {\n // Return the cell and output element which can be found *uniquely* in the notebook.\n // Note - this is a bit hacky, but it is done because the \"notebook_saving.Notebook\"\n // IPython event is triggered only after the cells have been serialised, which for\n // our purposes (turning an active figure into a static one), is too late.\n var cells = IPython.notebook.get_cells();\n var ncells = cells.length;\n for (var i = 0; i < ncells; i++) {\n var cell = cells[i];\n if (cell.cell_type === 'code') {\n for (var j = 0; j < cell.output_area.outputs.length; j++) {\n var data = cell.output_area.outputs[j];\n if (data.data) {\n // IPython >= 3 moved mimebundle to data attribute of output\n data = data.data;\n }\n if (data['text/html'] === html_output) {\n return [cell, data, j];\n }\n }\n }\n }\n};\n\n// Register the function which deals with the matplotlib target/channel.\n// The kernel may be null if the page has been refreshed.\nif (IPython.notebook.kernel !== null) {\n IPython.notebook.kernel.comm_manager.register_target(\n 'matplotlib',\n mpl.mpl_figure_comm\n );\n}\n", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "data": { - "text/html": [ - "
" - ], - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" - } - ], - "source": [ - "figure = plt.figure(figsize=(4,4))\n", - "cols, rows = 3, 3\n", - "for i in range(1, cols * rows + 1):\n", - " sample_idx = torch.randint(len(data), size=(1,)).item()\n", - " img = (data[sample_idx])\n", - " figure.add_subplot(rows, cols, i)\n", - " plt.axis(\"off\")\n", - " plt.imshow(img.squeeze().reshape([patch_size,patch_size]), cmap=\"gray\")\n", - "plt.show()" - ] - }, - { - "cell_type": "code", - "execution_count": 10, - "metadata": {}, - "outputs": [], - "source": [ - "### DEFINE MODEL\n", - "vanilla = inference.Vanilla()\n", - "sc = models.SimulSparseCoding(inference_method=vanilla,n_basis=n_features,sparsity_penalty=.01, n_features=n_features,inf_rate=.1)" - ] - }, - { - "cell_type": "code", - "execution_count": 11, - "metadata": {}, - "outputs": [ - { - "data": { - "application/javascript": "/* Put everything inside the global mpl namespace */\n/* global mpl */\nwindow.mpl = {};\n\nmpl.get_websocket_type = function () {\n if (typeof WebSocket !== 'undefined') {\n return WebSocket;\n } else if (typeof MozWebSocket !== 'undefined') {\n return MozWebSocket;\n } else {\n alert(\n 'Your browser does not have WebSocket support. ' +\n 'Please try Chrome, Safari or Firefox ≥ 6. ' +\n 'Firefox 4 and 5 are also supported but you ' +\n 'have to enable WebSockets in about:config.'\n );\n }\n};\n\nmpl.figure = function (figure_id, websocket, ondownload, parent_element) {\n this.id = figure_id;\n\n this.ws = websocket;\n\n this.supports_binary = this.ws.binaryType !== undefined;\n\n if (!this.supports_binary) {\n var warnings = document.getElementById('mpl-warnings');\n if (warnings) {\n warnings.style.display = 'block';\n warnings.textContent =\n 'This browser does not support binary websocket messages. ' +\n 'Performance may be slow.';\n }\n }\n\n this.imageObj = new Image();\n\n this.context = undefined;\n this.message = undefined;\n this.canvas = undefined;\n this.rubberband_canvas = undefined;\n this.rubberband_context = undefined;\n this.format_dropdown = undefined;\n\n this.image_mode = 'full';\n\n this.root = document.createElement('div');\n this.root.setAttribute('style', 'display: inline-block');\n this._root_extra_style(this.root);\n\n parent_element.appendChild(this.root);\n\n this._init_header(this);\n this._init_canvas(this);\n this._init_toolbar(this);\n\n var fig = this;\n\n this.waiting = false;\n\n this.ws.onopen = function () {\n fig.send_message('supports_binary', { value: fig.supports_binary });\n fig.send_message('send_image_mode', {});\n if (mpl.ratio !== 1) {\n fig.send_message('set_dpi_ratio', { dpi_ratio: mpl.ratio });\n }\n fig.send_message('refresh', {});\n };\n\n this.imageObj.onload = function () {\n if (fig.image_mode === 'full') {\n // Full images could contain transparency (where diff images\n // almost always do), so we need to clear the canvas so that\n // there is no ghosting.\n fig.context.clearRect(0, 0, fig.canvas.width, fig.canvas.height);\n }\n fig.context.drawImage(fig.imageObj, 0, 0);\n };\n\n this.imageObj.onunload = function () {\n fig.ws.close();\n };\n\n this.ws.onmessage = this._make_on_message_function(this);\n\n this.ondownload = ondownload;\n};\n\nmpl.figure.prototype._init_header = function () {\n var titlebar = document.createElement('div');\n titlebar.classList =\n 'ui-dialog-titlebar ui-widget-header ui-corner-all ui-helper-clearfix';\n var titletext = document.createElement('div');\n titletext.classList = 'ui-dialog-title';\n titletext.setAttribute(\n 'style',\n 'width: 100%; text-align: center; padding: 3px;'\n );\n titlebar.appendChild(titletext);\n this.root.appendChild(titlebar);\n this.header = titletext;\n};\n\nmpl.figure.prototype._canvas_extra_style = function (_canvas_div) {};\n\nmpl.figure.prototype._root_extra_style = function (_canvas_div) {};\n\nmpl.figure.prototype._init_canvas = function () {\n var fig = this;\n\n var canvas_div = (this.canvas_div = document.createElement('div'));\n canvas_div.setAttribute(\n 'style',\n 'border: 1px solid #ddd;' +\n 'box-sizing: content-box;' +\n 'clear: both;' +\n 'min-height: 1px;' +\n 'min-width: 1px;' +\n 'outline: 0;' +\n 'overflow: hidden;' +\n 'position: relative;' +\n 'resize: both;'\n );\n\n function on_keyboard_event_closure(name) {\n return function (event) {\n return fig.key_event(event, name);\n };\n }\n\n canvas_div.addEventListener(\n 'keydown',\n on_keyboard_event_closure('key_press')\n );\n canvas_div.addEventListener(\n 'keyup',\n on_keyboard_event_closure('key_release')\n );\n\n this._canvas_extra_style(canvas_div);\n this.root.appendChild(canvas_div);\n\n var canvas = (this.canvas = document.createElement('canvas'));\n canvas.classList.add('mpl-canvas');\n canvas.setAttribute('style', 'box-sizing: content-box;');\n\n this.context = canvas.getContext('2d');\n\n var backingStore =\n this.context.backingStorePixelRatio ||\n this.context.webkitBackingStorePixelRatio ||\n this.context.mozBackingStorePixelRatio ||\n this.context.msBackingStorePixelRatio ||\n this.context.oBackingStorePixelRatio ||\n this.context.backingStorePixelRatio ||\n 1;\n\n mpl.ratio = (window.devicePixelRatio || 1) / backingStore;\n\n var rubberband_canvas = (this.rubberband_canvas = document.createElement(\n 'canvas'\n ));\n rubberband_canvas.setAttribute(\n 'style',\n 'box-sizing: content-box; position: absolute; left: 0; top: 0; z-index: 1;'\n );\n\n var resizeObserver = new ResizeObserver(function (entries) {\n var nentries = entries.length;\n for (var i = 0; i < nentries; i++) {\n var entry = entries[i];\n var width, height;\n if (entry.contentBoxSize) {\n width = entry.contentBoxSize.inlineSize;\n height = entry.contentBoxSize.blockSize;\n } else {\n width = entry.contentRect.width;\n height = entry.contentRect.height;\n }\n\n // Keep the size of the canvas and rubber band canvas in sync with\n // the canvas container.\n canvas.setAttribute('width', width * mpl.ratio);\n canvas.setAttribute('height', height * mpl.ratio);\n canvas.setAttribute(\n 'style',\n 'width: ' + width + 'px; height: ' + height + 'px;'\n );\n\n rubberband_canvas.setAttribute('width', width);\n rubberband_canvas.setAttribute('height', height);\n\n // And update the size in Python. We ignore the initial 0/0 size\n // that occurs as the element is placed into the DOM, which should\n // otherwise not happen due to the minimum size styling.\n if (width != 0 && height != 0) {\n fig.request_resize(width, height);\n }\n }\n });\n resizeObserver.observe(canvas_div);\n\n function on_mouse_event_closure(name) {\n return function (event) {\n return fig.mouse_event(event, name);\n };\n }\n\n rubberband_canvas.addEventListener(\n 'mousedown',\n on_mouse_event_closure('button_press')\n );\n rubberband_canvas.addEventListener(\n 'mouseup',\n on_mouse_event_closure('button_release')\n );\n // Throttle sequential mouse events to 1 every 20ms.\n rubberband_canvas.addEventListener(\n 'mousemove',\n on_mouse_event_closure('motion_notify')\n );\n\n rubberband_canvas.addEventListener(\n 'mouseenter',\n on_mouse_event_closure('figure_enter')\n );\n rubberband_canvas.addEventListener(\n 'mouseleave',\n on_mouse_event_closure('figure_leave')\n );\n\n canvas_div.addEventListener('wheel', function (event) {\n if (event.deltaY < 0) {\n event.step = 1;\n } else {\n event.step = -1;\n }\n on_mouse_event_closure('scroll')(event);\n });\n\n canvas_div.appendChild(canvas);\n canvas_div.appendChild(rubberband_canvas);\n\n this.rubberband_context = rubberband_canvas.getContext('2d');\n this.rubberband_context.strokeStyle = '#000000';\n\n this._resize_canvas = function (width, height, forward) {\n if (forward) {\n canvas_div.style.width = width + 'px';\n canvas_div.style.height = height + 'px';\n }\n };\n\n // Disable right mouse context menu.\n this.rubberband_canvas.addEventListener('contextmenu', function (_e) {\n return false;\n });\n\n function set_focus() {\n canvas.focus();\n canvas_div.focus();\n }\n\n window.setTimeout(set_focus, 100);\n};\n\nmpl.figure.prototype._init_toolbar = function () {\n var fig = this;\n\n var toolbar = document.createElement('div');\n toolbar.classList = 'mpl-toolbar';\n this.root.appendChild(toolbar);\n\n function on_click_closure(name) {\n return function (_event) {\n return fig.toolbar_button_onclick(name);\n };\n }\n\n function on_mouseover_closure(tooltip) {\n return function (event) {\n if (!event.currentTarget.disabled) {\n return fig.toolbar_button_onmouseover(tooltip);\n }\n };\n }\n\n fig.buttons = {};\n var buttonGroup = document.createElement('div');\n buttonGroup.classList = 'mpl-button-group';\n for (var toolbar_ind in mpl.toolbar_items) {\n var name = mpl.toolbar_items[toolbar_ind][0];\n var tooltip = mpl.toolbar_items[toolbar_ind][1];\n var image = mpl.toolbar_items[toolbar_ind][2];\n var method_name = mpl.toolbar_items[toolbar_ind][3];\n\n if (!name) {\n /* Instead of a spacer, we start a new button group. */\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n buttonGroup = document.createElement('div');\n buttonGroup.classList = 'mpl-button-group';\n continue;\n }\n\n var button = (fig.buttons[name] = document.createElement('button'));\n button.classList = 'mpl-widget';\n button.setAttribute('role', 'button');\n button.setAttribute('aria-disabled', 'false');\n button.addEventListener('click', on_click_closure(method_name));\n button.addEventListener('mouseover', on_mouseover_closure(tooltip));\n\n var icon_img = document.createElement('img');\n icon_img.src = '_images/' + image + '.png';\n icon_img.srcset = '_images/' + image + '_large.png 2x';\n icon_img.alt = tooltip;\n button.appendChild(icon_img);\n\n buttonGroup.appendChild(button);\n }\n\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n\n var fmt_picker = document.createElement('select');\n fmt_picker.classList = 'mpl-widget';\n toolbar.appendChild(fmt_picker);\n this.format_dropdown = fmt_picker;\n\n for (var ind in mpl.extensions) {\n var fmt = mpl.extensions[ind];\n var option = document.createElement('option');\n option.selected = fmt === mpl.default_extension;\n option.innerHTML = fmt;\n fmt_picker.appendChild(option);\n }\n\n var status_bar = document.createElement('span');\n status_bar.classList = 'mpl-message';\n toolbar.appendChild(status_bar);\n this.message = status_bar;\n};\n\nmpl.figure.prototype.request_resize = function (x_pixels, y_pixels) {\n // Request matplotlib to resize the figure. Matplotlib will then trigger a resize in the client,\n // which will in turn request a refresh of the image.\n this.send_message('resize', { width: x_pixels, height: y_pixels });\n};\n\nmpl.figure.prototype.send_message = function (type, properties) {\n properties['type'] = type;\n properties['figure_id'] = this.id;\n this.ws.send(JSON.stringify(properties));\n};\n\nmpl.figure.prototype.send_draw_message = function () {\n if (!this.waiting) {\n this.waiting = true;\n this.ws.send(JSON.stringify({ type: 'draw', figure_id: this.id }));\n }\n};\n\nmpl.figure.prototype.handle_save = function (fig, _msg) {\n var format_dropdown = fig.format_dropdown;\n var format = format_dropdown.options[format_dropdown.selectedIndex].value;\n fig.ondownload(fig, format);\n};\n\nmpl.figure.prototype.handle_resize = function (fig, msg) {\n var size = msg['size'];\n if (size[0] !== fig.canvas.width || size[1] !== fig.canvas.height) {\n fig._resize_canvas(size[0], size[1], msg['forward']);\n fig.send_message('refresh', {});\n }\n};\n\nmpl.figure.prototype.handle_rubberband = function (fig, msg) {\n var x0 = msg['x0'] / mpl.ratio;\n var y0 = (fig.canvas.height - msg['y0']) / mpl.ratio;\n var x1 = msg['x1'] / mpl.ratio;\n var y1 = (fig.canvas.height - msg['y1']) / mpl.ratio;\n x0 = Math.floor(x0) + 0.5;\n y0 = Math.floor(y0) + 0.5;\n x1 = Math.floor(x1) + 0.5;\n y1 = Math.floor(y1) + 0.5;\n var min_x = Math.min(x0, x1);\n var min_y = Math.min(y0, y1);\n var width = Math.abs(x1 - x0);\n var height = Math.abs(y1 - y0);\n\n fig.rubberband_context.clearRect(\n 0,\n 0,\n fig.canvas.width / mpl.ratio,\n fig.canvas.height / mpl.ratio\n );\n\n fig.rubberband_context.strokeRect(min_x, min_y, width, height);\n};\n\nmpl.figure.prototype.handle_figure_label = function (fig, msg) {\n // Updates the figure title.\n fig.header.textContent = msg['label'];\n};\n\nmpl.figure.prototype.handle_cursor = function (fig, msg) {\n var cursor = msg['cursor'];\n switch (cursor) {\n case 0:\n cursor = 'pointer';\n break;\n case 1:\n cursor = 'default';\n break;\n case 2:\n cursor = 'crosshair';\n break;\n case 3:\n cursor = 'move';\n break;\n }\n fig.rubberband_canvas.style.cursor = cursor;\n};\n\nmpl.figure.prototype.handle_message = function (fig, msg) {\n fig.message.textContent = msg['message'];\n};\n\nmpl.figure.prototype.handle_draw = function (fig, _msg) {\n // Request the server to send over a new figure.\n fig.send_draw_message();\n};\n\nmpl.figure.prototype.handle_image_mode = function (fig, msg) {\n fig.image_mode = msg['mode'];\n};\n\nmpl.figure.prototype.handle_history_buttons = function (fig, msg) {\n for (var key in msg) {\n if (!(key in fig.buttons)) {\n continue;\n }\n fig.buttons[key].disabled = !msg[key];\n fig.buttons[key].setAttribute('aria-disabled', !msg[key]);\n }\n};\n\nmpl.figure.prototype.handle_navigate_mode = function (fig, msg) {\n if (msg['mode'] === 'PAN') {\n fig.buttons['Pan'].classList.add('active');\n fig.buttons['Zoom'].classList.remove('active');\n } else if (msg['mode'] === 'ZOOM') {\n fig.buttons['Pan'].classList.remove('active');\n fig.buttons['Zoom'].classList.add('active');\n } else {\n fig.buttons['Pan'].classList.remove('active');\n fig.buttons['Zoom'].classList.remove('active');\n }\n};\n\nmpl.figure.prototype.updated_canvas_event = function () {\n // Called whenever the canvas gets updated.\n this.send_message('ack', {});\n};\n\n// A function to construct a web socket function for onmessage handling.\n// Called in the figure constructor.\nmpl.figure.prototype._make_on_message_function = function (fig) {\n return function socket_on_message(evt) {\n if (evt.data instanceof Blob) {\n /* FIXME: We get \"Resource interpreted as Image but\n * transferred with MIME type text/plain:\" errors on\n * Chrome. But how to set the MIME type? It doesn't seem\n * to be part of the websocket stream */\n evt.data.type = 'image/png';\n\n /* Free the memory for the previous frames */\n if (fig.imageObj.src) {\n (window.URL || window.webkitURL).revokeObjectURL(\n fig.imageObj.src\n );\n }\n\n fig.imageObj.src = (window.URL || window.webkitURL).createObjectURL(\n evt.data\n );\n fig.updated_canvas_event();\n fig.waiting = false;\n return;\n } else if (\n typeof evt.data === 'string' &&\n evt.data.slice(0, 21) === 'data:image/png;base64'\n ) {\n fig.imageObj.src = evt.data;\n fig.updated_canvas_event();\n fig.waiting = false;\n return;\n }\n\n var msg = JSON.parse(evt.data);\n var msg_type = msg['type'];\n\n // Call the \"handle_{type}\" callback, which takes\n // the figure and JSON message as its only arguments.\n try {\n var callback = fig['handle_' + msg_type];\n } catch (e) {\n console.log(\n \"No handler for the '\" + msg_type + \"' message type: \",\n msg\n );\n return;\n }\n\n if (callback) {\n try {\n // console.log(\"Handling '\" + msg_type + \"' message: \", msg);\n callback(fig, msg);\n } catch (e) {\n console.log(\n \"Exception inside the 'handler_\" + msg_type + \"' callback:\",\n e,\n e.stack,\n msg\n );\n }\n }\n };\n};\n\n// from http://stackoverflow.com/questions/1114465/getting-mouse-location-in-canvas\nmpl.findpos = function (e) {\n //this section is from http://www.quirksmode.org/js/events_properties.html\n var targ;\n if (!e) {\n e = window.event;\n }\n if (e.target) {\n targ = e.target;\n } else if (e.srcElement) {\n targ = e.srcElement;\n }\n if (targ.nodeType === 3) {\n // defeat Safari bug\n targ = targ.parentNode;\n }\n\n // pageX,Y are the mouse positions relative to the document\n var boundingRect = targ.getBoundingClientRect();\n var x = e.pageX - (boundingRect.left + document.body.scrollLeft);\n var y = e.pageY - (boundingRect.top + document.body.scrollTop);\n\n return { x: x, y: y };\n};\n\n/*\n * return a copy of an object with only non-object keys\n * we need this to avoid circular references\n * http://stackoverflow.com/a/24161582/3208463\n */\nfunction simpleKeys(original) {\n return Object.keys(original).reduce(function (obj, key) {\n if (typeof original[key] !== 'object') {\n obj[key] = original[key];\n }\n return obj;\n }, {});\n}\n\nmpl.figure.prototype.mouse_event = function (event, name) {\n var canvas_pos = mpl.findpos(event);\n\n if (name === 'button_press') {\n this.canvas.focus();\n this.canvas_div.focus();\n }\n\n var x = canvas_pos.x * mpl.ratio;\n var y = canvas_pos.y * mpl.ratio;\n\n this.send_message(name, {\n x: x,\n y: y,\n button: event.button,\n step: event.step,\n guiEvent: simpleKeys(event),\n });\n\n /* This prevents the web browser from automatically changing to\n * the text insertion cursor when the button is pressed. We want\n * to control all of the cursor setting manually through the\n * 'cursor' event from matplotlib */\n event.preventDefault();\n return false;\n};\n\nmpl.figure.prototype._key_event_extra = function (_event, _name) {\n // Handle any extra behaviour associated with a key event\n};\n\nmpl.figure.prototype.key_event = function (event, name) {\n // Prevent repeat events\n if (name === 'key_press') {\n if (event.which === this._key) {\n return;\n } else {\n this._key = event.which;\n }\n }\n if (name === 'key_release') {\n this._key = null;\n }\n\n var value = '';\n if (event.ctrlKey && event.which !== 17) {\n value += 'ctrl+';\n }\n if (event.altKey && event.which !== 18) {\n value += 'alt+';\n }\n if (event.shiftKey && event.which !== 16) {\n value += 'shift+';\n }\n\n value += 'k';\n value += event.which.toString();\n\n this._key_event_extra(event, name);\n\n this.send_message(name, { key: value, guiEvent: simpleKeys(event) });\n return false;\n};\n\nmpl.figure.prototype.toolbar_button_onclick = function (name) {\n if (name === 'download') {\n this.handle_save(this, null);\n } else {\n this.send_message('toolbar_button', { name: name });\n }\n};\n\nmpl.figure.prototype.toolbar_button_onmouseover = function (tooltip) {\n this.message.textContent = tooltip;\n};\nmpl.toolbar_items = [[\"Home\", \"Reset original view\", \"fa fa-home icon-home\", \"home\"], [\"Back\", \"Back to previous view\", \"fa fa-arrow-left icon-arrow-left\", \"back\"], [\"Forward\", \"Forward to next view\", \"fa fa-arrow-right icon-arrow-right\", \"forward\"], [\"\", \"\", \"\", \"\"], [\"Pan\", \"Left button pans, Right button zooms\\nx/y fixes axis, CTRL fixes aspect\", \"fa fa-arrows icon-move\", \"pan\"], [\"Zoom\", \"Zoom to rectangle\\nx/y fixes axis, CTRL fixes aspect\", \"fa fa-square-o icon-check-empty\", \"zoom\"], [\"\", \"\", \"\", \"\"], [\"Download\", \"Download plot\", \"fa fa-floppy-o icon-save\", \"download\"]];\n\nmpl.extensions = [\"eps\", \"jpeg\", \"pdf\", \"png\", \"ps\", \"raw\", \"svg\", \"tif\"];\n\nmpl.default_extension = \"png\";/* global mpl */\n\nvar comm_websocket_adapter = function (comm) {\n // Create a \"websocket\"-like object which calls the given IPython comm\n // object with the appropriate methods. Currently this is a non binary\n // socket, so there is still some room for performance tuning.\n var ws = {};\n\n ws.close = function () {\n comm.close();\n };\n ws.send = function (m) {\n //console.log('sending', m);\n comm.send(m);\n };\n // Register the callback with on_msg.\n comm.on_msg(function (msg) {\n //console.log('receiving', msg['content']['data'], msg);\n // Pass the mpl event to the overridden (by mpl) onmessage function.\n ws.onmessage(msg['content']['data']);\n });\n return ws;\n};\n\nmpl.mpl_figure_comm = function (comm, msg) {\n // This is the function which gets called when the mpl process\n // starts-up an IPython Comm through the \"matplotlib\" channel.\n\n var id = msg.content.data.id;\n // Get hold of the div created by the display call when the Comm\n // socket was opened in Python.\n var element = document.getElementById(id);\n var ws_proxy = comm_websocket_adapter(comm);\n\n function ondownload(figure, _format) {\n window.open(figure.canvas.toDataURL());\n }\n\n var fig = new mpl.figure(id, ws_proxy, ondownload, element);\n\n // Call onopen now - mpl needs it, as it is assuming we've passed it a real\n // web socket which is closed, not our websocket->open comm proxy.\n ws_proxy.onopen();\n\n fig.parent_element = element;\n fig.cell_info = mpl.find_output_cell(\"
\");\n if (!fig.cell_info) {\n console.error('Failed to find cell for figure', id, fig);\n return;\n }\n};\n\nmpl.figure.prototype.handle_close = function (fig, msg) {\n var width = fig.canvas.width / mpl.ratio;\n fig.root.removeEventListener('remove', this._remove_fig_handler);\n\n // Update the output cell to use the data from the current canvas.\n fig.push_to_output();\n var dataURL = fig.canvas.toDataURL();\n // Re-enable the keyboard manager in IPython - without this line, in FF,\n // the notebook keyboard shortcuts fail.\n IPython.keyboard_manager.enable();\n fig.parent_element.innerHTML =\n '';\n fig.close_ws(fig, msg);\n};\n\nmpl.figure.prototype.close_ws = function (fig, msg) {\n fig.send_message('closing', msg);\n // fig.ws.close()\n};\n\nmpl.figure.prototype.push_to_output = function (_remove_interactive) {\n // Turn the data on the canvas into data in the output cell.\n var width = this.canvas.width / mpl.ratio;\n var dataURL = this.canvas.toDataURL();\n this.cell_info[1]['text/html'] =\n '';\n};\n\nmpl.figure.prototype.updated_canvas_event = function () {\n // Tell IPython that the notebook contents must change.\n IPython.notebook.set_dirty(true);\n this.send_message('ack', {});\n var fig = this;\n // Wait a second, then push the new image to the DOM so\n // that it is saved nicely (might be nice to debounce this).\n setTimeout(function () {\n fig.push_to_output();\n }, 1000);\n};\n\nmpl.figure.prototype._init_toolbar = function () {\n var fig = this;\n\n var toolbar = document.createElement('div');\n toolbar.classList = 'btn-toolbar';\n this.root.appendChild(toolbar);\n\n function on_click_closure(name) {\n return function (_event) {\n return fig.toolbar_button_onclick(name);\n };\n }\n\n function on_mouseover_closure(tooltip) {\n return function (event) {\n if (!event.currentTarget.disabled) {\n return fig.toolbar_button_onmouseover(tooltip);\n }\n };\n }\n\n fig.buttons = {};\n var buttonGroup = document.createElement('div');\n buttonGroup.classList = 'btn-group';\n var button;\n for (var toolbar_ind in mpl.toolbar_items) {\n var name = mpl.toolbar_items[toolbar_ind][0];\n var tooltip = mpl.toolbar_items[toolbar_ind][1];\n var image = mpl.toolbar_items[toolbar_ind][2];\n var method_name = mpl.toolbar_items[toolbar_ind][3];\n\n if (!name) {\n /* Instead of a spacer, we start a new button group. */\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n buttonGroup = document.createElement('div');\n buttonGroup.classList = 'btn-group';\n continue;\n }\n\n button = fig.buttons[name] = document.createElement('button');\n button.classList = 'btn btn-default';\n button.href = '#';\n button.title = name;\n button.innerHTML = '';\n button.addEventListener('click', on_click_closure(method_name));\n button.addEventListener('mouseover', on_mouseover_closure(tooltip));\n buttonGroup.appendChild(button);\n }\n\n if (buttonGroup.hasChildNodes()) {\n toolbar.appendChild(buttonGroup);\n }\n\n // Add the status bar.\n var status_bar = document.createElement('span');\n status_bar.classList = 'mpl-message pull-right';\n toolbar.appendChild(status_bar);\n this.message = status_bar;\n\n // Add the close button to the window.\n var buttongrp = document.createElement('div');\n buttongrp.classList = 'btn-group inline pull-right';\n button = document.createElement('button');\n button.classList = 'btn btn-mini btn-primary';\n button.href = '#';\n button.title = 'Stop Interaction';\n button.innerHTML = '';\n button.addEventListener('click', function (_evt) {\n fig.handle_close(fig, {});\n });\n button.addEventListener(\n 'mouseover',\n on_mouseover_closure('Stop Interaction')\n );\n buttongrp.appendChild(button);\n var titlebar = this.root.querySelector('.ui-dialog-titlebar');\n titlebar.insertBefore(buttongrp, titlebar.firstChild);\n};\n\nmpl.figure.prototype._remove_fig_handler = function () {\n this.close_ws(this, {});\n};\n\nmpl.figure.prototype._root_extra_style = function (el) {\n el.style.boxSizing = 'content-box'; // override notebook setting of border-box.\n el.addEventListener('remove', this._remove_fig_handler);\n};\n\nmpl.figure.prototype._canvas_extra_style = function (el) {\n // this is important to make the div 'focusable\n el.setAttribute('tabindex', 0);\n // reach out to IPython and tell the keyboard manager to turn it's self\n // off when our div gets focus\n\n // location in version 3\n if (IPython.notebook.keyboard_manager) {\n IPython.notebook.keyboard_manager.register_events(el);\n } else {\n // location in version 2\n IPython.keyboard_manager.register_events(el);\n }\n};\n\nmpl.figure.prototype._key_event_extra = function (event, _name) {\n var manager = IPython.notebook.keyboard_manager;\n if (!manager) {\n manager = IPython.keyboard_manager;\n }\n\n // Check for shift+enter\n if (event.shiftKey && event.which === 13) {\n this.canvas_div.blur();\n // select the cell after this one\n var index = IPython.notebook.find_cell_index(this.cell_info[0]);\n IPython.notebook.select(index + 1);\n }\n};\n\nmpl.figure.prototype.handle_save = function (fig, _msg) {\n fig.ondownload(fig, null);\n};\n\nmpl.find_output_cell = function (html_output) {\n // Return the cell and output element which can be found *uniquely* in the notebook.\n // Note - this is a bit hacky, but it is done because the \"notebook_saving.Notebook\"\n // IPython event is triggered only after the cells have been serialised, which for\n // our purposes (turning an active figure into a static one), is too late.\n var cells = IPython.notebook.get_cells();\n var ncells = cells.length;\n for (var i = 0; i < ncells; i++) {\n var cell = cells[i];\n if (cell.cell_type === 'code') {\n for (var j = 0; j < cell.output_area.outputs.length; j++) {\n var data = cell.output_area.outputs[j];\n if (data.data) {\n // IPython >= 3 moved mimebundle to data attribute of output\n data = data.data;\n }\n if (data['text/html'] === html_output) {\n return [cell, data, j];\n }\n }\n }\n }\n};\n\n// Register the function which deals with the matplotlib target/channel.\n// The kernel may be null if the page has been refreshed.\nif (IPython.notebook.kernel !== null) {\n IPython.notebook.kernel.comm_manager.register_target(\n 'matplotlib',\n mpl.mpl_figure_comm\n );\n}\n", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "data": { - "text/html": [ - "
" - ], - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "ename": "ValueError", - "evalue": "sparsecoding error: nan in dictionary.", - "output_type": "error", - "traceback": [ - "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[0;31mValueError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[0;32mIn[11], line 14\u001b[0m\n\u001b[1;32m 10\u001b[0m losses \u001b[39m=\u001b[39m np\u001b[39m.\u001b[39marray([])\n\u001b[1;32m 12\u001b[0m \u001b[39mfor\u001b[39;00m i \u001b[39min\u001b[39;00m \u001b[39mrange\u001b[39m(n_epoch\u001b[39m/\u001b[39m\u001b[39m/\u001b[39mmontage_update_rate):\n\u001b[1;32m 13\u001b[0m \u001b[39m# learn dictionary\u001b[39;00m\n\u001b[0;32m---> 14\u001b[0m loss \u001b[39m=\u001b[39m sc\u001b[39m.\u001b[39;49msimultaneous_update(data\u001b[39m=\u001b[39;49mdata,batch_size\u001b[39m=\u001b[39;49m\u001b[39m100\u001b[39;49m)\n\u001b[1;32m 15\u001b[0m losses \u001b[39m=\u001b[39m np\u001b[39m.\u001b[39mconcatenate([losses,loss])\n\u001b[1;32m 16\u001b[0m \u001b[39m# update montage\u001b[39;00m\n", - "File \u001b[0;32m~/sparsecoding/sparsecoding/models.py:251\u001b[0m, in \u001b[0;36mSimulSparseCoding.simultaneous_update\u001b[0;34m(self, data, batch_size)\u001b[0m\n\u001b[1;32m 248\u001b[0m \u001b[39mself\u001b[39m\u001b[39m.\u001b[39mdictionary \u001b[39m-\u001b[39m\u001b[39m=\u001b[39m (\u001b[39mself\u001b[39m\u001b[39m.\u001b[39mtime_step\u001b[39m/\u001b[39m\u001b[39mself\u001b[39m\u001b[39m.\u001b[39mlearn_rate) \u001b[39m*\u001b[39m \u001b[39mself\u001b[39m\u001b[39m.\u001b[39mcompute_grad_dict(batch, a)\n\u001b[1;32m 250\u001b[0m \u001b[39m# normalize dictionary\u001b[39;00m\n\u001b[0;32m--> 251\u001b[0m \u001b[39mself\u001b[39;49m\u001b[39m.\u001b[39;49mnormalize_dictionary()\n\u001b[1;32m 253\u001b[0m \u001b[39m# compute current loss\u001b[39;00m\n\u001b[1;32m 254\u001b[0m loss \u001b[39m=\u001b[39m \u001b[39mself\u001b[39m\u001b[39m.\u001b[39mcompute_loss(batch, a)\n", - "File \u001b[0;32m~/sparsecoding/sparsecoding/models.py:77\u001b[0m, in \u001b[0;36mSparseCoding.normalize_dictionary\u001b[0;34m(self)\u001b[0m\n\u001b[1;32m 75\u001b[0m \u001b[39m\"\"\"Normalize columns of dictionary matrix to unit norm.\"\"\"\u001b[39;00m\n\u001b[1;32m 76\u001b[0m \u001b[39mself\u001b[39m\u001b[39m.\u001b[39mdictionary \u001b[39m=\u001b[39m \u001b[39mself\u001b[39m\u001b[39m.\u001b[39mdictionary\u001b[39m.\u001b[39mdiv_(\u001b[39mself\u001b[39m\u001b[39m.\u001b[39mdictionary\u001b[39m.\u001b[39mnorm(p\u001b[39m=\u001b[39m\u001b[39m2\u001b[39m, dim\u001b[39m=\u001b[39m\u001b[39m0\u001b[39m))\n\u001b[0;32m---> 77\u001b[0m \u001b[39mself\u001b[39;49m\u001b[39m.\u001b[39;49mchecknan()\n", - "File \u001b[0;32m~/sparsecoding/sparsecoding/models.py:175\u001b[0m, in \u001b[0;36mSparseCoding.checknan\u001b[0;34m(self, data, name)\u001b[0m\n\u001b[1;32m 173\u001b[0m \u001b[39mraise\u001b[39;00m \u001b[39mValueError\u001b[39;00m(\u001b[39m\"\u001b[39m\u001b[39msparsecoding error: nan in \u001b[39m\u001b[39m%s\u001b[39;00m\u001b[39m.\u001b[39m\u001b[39m\"\u001b[39m \u001b[39m%\u001b[39m (name))\n\u001b[1;32m 174\u001b[0m \u001b[39mif\u001b[39;00m torch\u001b[39m.\u001b[39misnan(\u001b[39mself\u001b[39m\u001b[39m.\u001b[39mdictionary)\u001b[39m.\u001b[39many():\n\u001b[0;32m--> 175\u001b[0m \u001b[39mraise\u001b[39;00m \u001b[39mValueError\u001b[39;00m(\u001b[39m\"\u001b[39m\u001b[39msparsecoding error: nan in dictionary.\u001b[39m\u001b[39m\"\u001b[39m)\n", - "\u001b[0;31mValueError\u001b[0m: sparsecoding error: nan in dictionary." - ] - } - ], - "source": [ - "%matplotlib notebook\n", - "\n", - "n_epoch = 100\n", - "montage_update_rate = 10\n", - "\n", - "# Plot Updates\n", - "nrow = 16\n", - "fig,ax = plot_dictionary(sc.dictionary,nrow=nrow)\n", - "\n", - "losses = np.array([])\n", - "\n", - "for i in range(n_epoch//montage_update_rate):\n", - " # learn dictionary\n", - " loss = sc.simultaneous_update(data=data,batch_size=100)\n", - " losses = np.concatenate([losses,loss])\n", - " # update montage\n", - " fig,ax = plot_dictionary(sc.dictionary,fig=fig,ax=ax,title='iteration: %d of %d'%(i*montage_update_rate,n_epoch),nrow=nrow)\n", - "\n", - "fig,ax = plot_dictionary(sc.dictionary,fig=fig,ax=ax,title='iteration: %d of %d'%(n_epoch,n_epoch),nrow=nrow)" - ] - }, - { - "cell_type": "code", - "execution_count": 8, - "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "> \u001b[0;32m/Users/andrewligeralde/projects/sparsecoding/sparsecoding/models.py\u001b[0m(197)\u001b[0;36mchecknan\u001b[0;34m()\u001b[0m\n", - "\u001b[0;32m 195 \u001b[0;31m \u001b[0;32mraise\u001b[0m \u001b[0mValueError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'sparsecoding error: nan in %s.'\u001b[0m\u001b[0;34m%\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mname\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 196 \u001b[0;31m \u001b[0;32mif\u001b[0m \u001b[0mtorch\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0misnan\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdictionary\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0many\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m--> 197 \u001b[0;31m \u001b[0;32mraise\u001b[0m \u001b[0mValueError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'sparsecoding error: nan in dictionary.'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 198 \u001b[0;31m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 199 \u001b[0;31m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\n", - "ipdb> t\n", - "*** NameError: name 't' is not defined\n", - "ipdb> i\n", - "*** NameError: name 'i' is not defined\n", - "ipdb> up\n", - "> \u001b[0;32m/Users/andrewligeralde/projects/sparsecoding/sparsecoding/models.py\u001b[0m(91)\u001b[0;36mnormalize_dictionary\u001b[0;34m()\u001b[0m\n", - "\u001b[0;32m 89 \u001b[0;31m '''\n", - "\u001b[0m\u001b[0;32m 90 \u001b[0;31m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdictionary\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdictionary\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdiv_\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdictionary\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mnorm\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mp\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;36m2\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mdim\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;36m0\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m---> 91 \u001b[0;31m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mchecknan\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 92 \u001b[0;31m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 93 \u001b[0;31m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\n", - "ipdb> up\n", - "> \u001b[0;32m/Users/andrewligeralde/projects/sparsecoding/sparsecoding/models.py\u001b[0m(268)\u001b[0;36msimultaneous_update\u001b[0;34m()\u001b[0m\n", - "\u001b[0;32m 266 \u001b[0;31m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 267 \u001b[0;31m \u001b[0;31m# normalize dictionary\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m--> 268 \u001b[0;31m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mnormalize_dictionary\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 269 \u001b[0;31m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\u001b[0;32m 270 \u001b[0;31m \u001b[0;31m# compute current loss\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n", - "\u001b[0m\n", - "ipdb> t\n", - "8\n", - "ipdb> exit\n" - ] - } - ], - "source": [ - "%debug" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [] - } - ], - "metadata": { - "kernelspec": { - "display_name": "diffpure", - "language": "python", - "name": "python3" - }, - "language_info": { - "codemirror_mode": { - "name": "ipython", - "version": 3 - }, - "file_extension": ".py", - "mimetype": "text/x-python", - "name": "python", - "nbconvert_exporter": "python", - "pygments_lexer": "ipython3", - "version": "3.8.15" - }, - "vscode": { - "interpreter": { - "hash": "d72a90d5b31f26b8c0bd074a609f6fc0426ac9a26fb3bdfd3db33ca5f8d1f9d8" - } - } - }, - "nbformat": 4, - "nbformat_minor": 4 -} diff --git a/sparsecoding/models.py b/sparsecoding/models.py index 714e789..5f19db1 100644 --- a/sparsecoding/models.py +++ b/sparsecoding/models.py @@ -207,47 +207,3 @@ def save_dictionary(self, filename): filehandler = open(filename, "wb") pkl.dump(self.get_numpy_dictionary(), filehandler) filehandler.close() - - -class SimulSparseCoding(SparseCoding): - def __init__(self, inference_method, n_basis, n_features, sparsity_penalty, - inf_rate=1, learn_rate=1, time_step=1, t_max=1000, - device=None): - super().__init__(inference_method, n_basis, n_features, - sparsity_penalty) - self.inf_rate = inf_rate - self.learn_rate = learn_rate - self.time_step = time_step - self.t_max = t_max - self.device = device - - def simultaneous_update(self, data, batch_size): - losses = [] - dataloader = DataLoader(data, batch_size=batch_size, shuffle=True) - iterloader = iter(dataloader) - a = torch.rand((batch_size, self.n_basis)).to(self.device) - - for t in range(int(self.t_max/self.time_step)): - try: - batch = next(iterloader) - except StopIteration: - dataloader = DataLoader(data, batch_size=batch_size, - shuffle=True) - iterloader = iter(dataloader) - batch = next(iterloader) - - # update coefficients - residual = batch - (self.dictionary@a.t()).t() - a -= (self.time_step/self.inf_rate) * self.inference_method.grad(residual, self.dictionary, a) - - # update dictionary - self.dictionary -= (self.time_step/self.learn_rate) * self.compute_grad_dict(batch, a) - - # normalize dictionary - self.normalize_dictionary() - - # compute current loss - loss = self.compute_loss(batch, a) - - losses.append(loss) - return np.asarray(losses)