Update paper.bib

qurit · Oct 9, 2024 · 16c0acc · 16c0acc
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commit 16c0acc
Showing 1 changed file with 39 additions and 52 deletions.
diff --git a/Paper/paper.bib b/Paper/paper.bib
@@ -1,4 +1,26 @@
-@article{Fedorov2012,
+@article{Anderson2021-fp,
+  title     = "Simple Python Module for Conversions Between {DICOM} Images and Radiation Therapy Structures, Masks, and Prediction Arrays",
+  author    = {Anderson, Brian M and Wahid, Kareem A and Brock, Kristy K},
+  journal   = {Pract. Radiat. Oncol.},
+  publisher = {Elsevier},
+  volume    = {11},
+  number    = {3},
+  pages     = {226--229},
+  month     = {Feb},
+  year      = {2021},
+  language  = {en},
+  doi       = {10.1016/j.prro.2021.02.003}
+}
+
+@misc{Creators_The_MONAI_Consortium_undated-or,
+  title     = {Project {MONAI}},
+  author    = {{Creators The MONAI Consortium}},
+  doi       = {10.48550/arXiv.2211.02701},
+  year      = {2022},
+  url       = {https://arxiv.org/abs/2211.02701}
+}
+
+@article{Fedorov2012-ax,
   title     = "{3D} Slicer as an image computing platform for the Quantitative Imaging Network",
   author    = {Fedorov, Andriy and Beichel, Reinhard and Kalpathy-Cramer, Jayashree and Finet, Julien and Fillion-Robin, Jean-Christophe and Pujol, Sonia and Bauer, Christian and Jennings, Dominique and Fennessy, Fiona and Sonka, Milan and Buatti, John and Aylward, Stephen and Miller, James V and Pieper, Steve and Kikinis, Ron},
   journal   = {Magn. Reson. Imaging},
@@ -12,15 +34,21 @@ @article{Fedorov2012
   doi       = {10.1016/j.mri.2012.05.001}
 }
 
-@misc{Creators_The_MONAI_Consortium,
-  title     = {Project {MONAI}},
-  author    = {{Creators The MONAI Consortium}},
-  doi       = {10.48550/arXiv.2211.02701},
-  year      = {2022},
-  url       = {https://arxiv.org/abs/2211.02701}
+@article{Nioche2018-ct,
+  title     = "{LIFEx}: A Freeware for Radiomic Feature Calculation in Multimodality Imaging to Accelerate Advances in the Characterization of Tumor Heterogeneity",
+  author    = {Nioche, Christophe and Orlhac, Fanny and Boughdad, Sarah and Reuz{\'e}, Sylvain and Goya-Outi, Jessica and Robert, Charlotte and Pellot-Barakat, Claire and Soussan, Michael and Frouin, Fr{\'e}d{\'e}rique and Buvat, Ir{\`e}ne},
+  journal   = {Cancer Res.},
+  publisher = {AACR},
+  volume    = {78},
+  number    = {16},
+  pages     = {4786--4789},
+  month     = {Aug},
+  year      = {2018},
+  language  = {en},
+  doi       = {10.1158/0008-5472.can-18-0125}
 }
 
-@article{Perez-Garcia2021,
+@article{Perez-Garcia2021-jf,
   title     = "{TorchIO}: A Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning",
   author    = {P{\'e}rez-Garc{\'i}a, Fernando and Sparks, Rachel and Ourselin, S{\'e}bastien},
   journal   = {Comput. Methods Programs Biomed.},
@@ -34,21 +62,7 @@ @article{Perez-Garcia2021
   doi       = {10.1016/j.cmpb.2021.106236}
 }
 
-@article{Anderson2021,
-  title     = "Simple Python Module for Conversions Between {DICOM} Images and Radiation Therapy Structures, Masks, and Prediction Arrays",
-  author    = {Anderson, Brian M and Wahid, Kareem A and Brock, Kristy K},
-  journal   = {Pract. Radiat. Oncol.},
-  publisher = {Elsevier},
-  volume    = {11},
-  number    = {3},
-  pages     = {226--229},
-  month     = {Feb},
-  year      = {2021},
-  language  = {en},
-  doi       = {10.1016/j.prro.2021.02.003}
-}
-
-@article{Rufenacht2023,
+@article{Rufenacht2023-as,
   title     = {PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion},
   author    = {R{\"u}fenacht, Elias and Kamath, Amit and Suter, Yannick and Poel, Robert and Ermi, {\"O}mer},
   journal   = {Journal of Open Source Software},
@@ -59,7 +73,7 @@ @article{Rufenacht2023
   doi       = {10.21105/joss.04675}
 }
 
-@article{Whybra2023,
+@article{Whybra2023-en,
   title     = "Sensitivity of standardised radiomics algorithms to mask generation across different software platforms",
   author    = {Whybra, Philip and Spezi, Emiliano},
   journal   = {Sci. Rep.},
@@ -72,34 +86,7 @@ @article{Whybra2023
   doi       = {10.1038/s41598-023-41475-w}
 }
 
-@article{Zwanenburg2020,
-  title     = {The Image Biomarker Standardisation Initiative: Standardised Quantitative Radiomics for High-Throughput Image-based Phenotyping},
-  author    = {Zwanenburg, Alex and Valli{\`e}res, Martin and Abdalah, Mohamed A and Aerts, Hugo J W L and Andrearczyk, Vincent and Apte, Aditya and Ashrafinia, Shima and Bakas, Spyridon and Beukinga, Renger J and Boellaard, Ronald and Bogowicz, Margarita and Boldrini, Laura and Buvat, Ir{\`e}ne and Cook, Gary and Davatzikos, Christos and Depeursinge, Adrien and Desseroit, Marie-Claire and Dunet, Vincent and Echegaray, Santiago and El Naqa, Issam and Fave, Xenia and F{\"o}rster, Mathieu and Goh, Vicky and G{\"o}nen, Mehmet and Gollub, Marc and Grossmann, Patrick and Hakimi, Adam A and Hatt, Mathieu and Isensee, Fabian and Lambin, Philippe and Lee, Jeongjin and Leijenaar, Ralph T H and Liptrot, Matthew G and Losnegard, Are and Maier-Hein, Klaus H and Morin, Olivier and Mountz, James M and Nioche, Christophe and Orlhac, Fanny and Peet, Andrew W and Rao, Arvind and Scherer, Daniel and Schleiermacher, Geraldine and Schmidt-Richberg, Alexander and Schoemaker, Matthew and Shafiq-ul Hassan, Muhammad and Siegel, Eliot L and Silva, Mariana and Sousa, Joana and Traverso, Alberto and De Umbrajkar, Mahesh and Valentine, James W and van Griethuysen, Joost J M and Walsh, Sarah and Welk, Alexandra and Wilhelm, Christoph and Wright, Katia L and Yip, Stephen S F and Zeng, Jin and Fennessy, Fiona M and Mak, Raymond H and Pfaehler, Erik and Baessler, Benjamin},
-  journal   = {Radiology},
-  volume    = {295},
-  number    = {2},
-  pages     = {328--338},
-  month     = {May},
-  year      = {2020},
-  language  = {en},
-  doi       = {10.1148/radiol.2020191145}
-}
-
-@article{Nioche2018,
-  title     = "{LIFEx}: A Freeware for Radiomic Feature Calculation in Multimodality Imaging to Accelerate Advances in the Characterization of Tumor Heterogeneity",
-  author    = {Nioche, Christophe and Orlhac, Fanny and Boughdad, Sarah and Reuz{\'e}, Sylvain and Goya-Outi, Jessica and Robert, Charlotte and Pellot-Barakat, Claire and Soussan, Michael and Frouin, Fr{\'e}d{\'e}rique and Buvat, Ir{\`e}ne},
-  journal   = {Cancer Res.},
-  publisher = {AACR},
-  volume    = {78},
-  number    = {16},
-  pages     = {4786--4789},
-  month     = {Aug},
-  year      = {2018},
-  language  = {en},
-  doi       = {10.1158/0008-5472.can-18-0125}
-}
-
-@article{Yousefirizi2024,
+@article{Yousefirizi2023-ax,
   title     = {From code sharing to sharing of implementations: Advancing reproducible AI development for medical imaging through federated testing},
   journal   = {Journal of Medical Imaging and Radiation Sciences},
   volume    = {55},