From f45a6d3b3ff2a1b84ac72b8a45c564fc6c237893 Mon Sep 17 00:00:00 2001 From: Niclas Grote Date: Fri, 5 Jul 2024 17:27:14 +0200 Subject: [PATCH 1/2] pinned pandas version to 1.5.3 fixes #37 --- CHANGELOG.rst | 16 ++++++++++++++++ requirements.txt | 2 +- 2 files changed, 17 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.rst b/CHANGELOG.rst index 56caa9a..802c39d 100644 --- a/CHANGELOG.rst +++ b/CHANGELOG.rst @@ -1,6 +1,22 @@ Changelog ============ +0.5.2dev +--------------------------------------------- + +**Added** + +**Fixed** + +* [#37](https://github.com/qbic-pipelines/querynator/issues/37): fixed bug in `query-api-civic` that caused the containerized tool to fail when querying CIViC. + +**Dependencies** + +* pinned `pandas` to version 1.5.3 to fix deprecation issues with `pandas 2.x` in `querynator` and `civicpy`. + +**Deprecated** + + 0.5.1 - Sulfur Io (2024-07-03) --------------------------------------------- diff --git a/requirements.txt b/requirements.txt index 784287e..76d5ba7 100644 --- a/requirements.txt +++ b/requirements.txt @@ -6,7 +6,7 @@ httplib2 requests requests-cache urllib3<2 -pandas~=1.5.1 +pandas==1.5.3 numpy==1.24.4 civicpy~=3.0.0 pyvcf3~=1.0.3 From 14dfc396f65c6e2754f65dd262e94da1f61753c0 Mon Sep 17 00:00:00 2001 From: Niclas Grote Date: Fri, 5 Jul 2024 17:28:34 +0200 Subject: [PATCH 2/2] ready for release --- CHANGELOG.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.rst b/CHANGELOG.rst index 802c39d..ead10a9 100644 --- a/CHANGELOG.rst +++ b/CHANGELOG.rst @@ -1,7 +1,7 @@ Changelog ============ -0.5.2dev +0.5.2 - Sulfur Io (2024-07-05) --------------------------------------------- **Added**