Failure to open file

[asouzujoseph]

Hi,
I successfully ran the demo examples but when I tried replicating the same process with my samples, I got an error as shown below:

docker run --rm -v /home/share/projects/data-other/genetics_pipeline/cnv_Pipeline/bamgineer/docker-example:/src -it suluxan/bamgineer-v2 -config /src/inputs/config.cfg -splitbamdir /src/splitbams -cnv_bed /src/inputs/cnv.bed -vcf /src/inputs/phased_no_indel_chr13.vcf -exons /src/inputs/exons.bed -outbam /src/outputs/tumour.bam -results /src/outputs

('OPTIONS:', Namespace(cancerType=None, chrList=None, cnvBed='/src/inputs/cnv.bed', configfile='/src/inputs/config.cfg', ctDNA=False, exons='/src/inputs/exons.bed', inbamFile=None, outBamFile='/src/outputs/tumour.bam', outputDir='/src/outputs', phase=False, singleXY=False, splitbams='/src/splitbams', vcf='/src/inputs/phased_no_indel_chr13.vcf'))

/src/outputs
___ generating phased bed ___
___ extracting roi bams ___
[E::hts_open] fail to open file '/src/outputs/tmpbams/chr13_roigainABB48941605.bam'
Exception in thread Thread-1:
Traceback (most recent call last):
File "/usr/lib/python2.7/threading.py", line 801, in __bootstrap_inner
self.run()
File "/usr/lib/python2.7/threading.py", line 754, in run
self.__target(*self.__args, **self.__kwargs)
File "/bamgineer/src/helpers/handlers.py", line 76, in receive
record = self.queue.get(True, self.polltime)
File "/usr/local/lib/python2.7/dist-packages/multiprocess/queues.py", line 138, in get
res = self._recv()
File "/usr/local/lib/python2.7/dist-packages/dill/_dill.py", line 275, in loads
return load(file, ignore, **kwds)
File "/usr/local/lib/python2.7/dist-packages/dill/_dill.py", line 270, in load
return Unpickler(file, ignore=ignore, **kwds).load()
File "/usr/local/lib/python2.7/dist-packages/dill/_dill.py", line 472, in load
obj = StockUnpickler.load(self)
File "/usr/lib/python2.7/pickle.py", line 864, in load
dispatchkey
File "/usr/lib/python2.7/pickle.py", line 1139, in load_reduce
value = func(*args)
TypeError: init() takes exactly 2 arguments (1 given)

Please, how can I resolve this problem?