ci: investigate the failure while installing bcolz package during tests

[juarezr]

Problem description

What's happenning

A clear and concise description of what the bug is. Please explain:

• There is a failure in the CI while installing the bcolz pip package
• It's dismissed with this warning:
  • Dismissed failure installing some optional package. Resuming tests...

Expected behavior

A clear and concise description of intended behavior. Please explain:

• Discover:
  • If it's a problem.
  • When it started happening.
  • If it's worthwhile to fix it.

Scenario for reprodution

Reproducible test case

Please provide a minimal, reproducible code sample, a copy-pastable example if possible:

  Collecting numpy>=1.7 (from bcolz->-r requirements-optional.txt (line 14))
    Using cached numpy-1.21.6-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.7 MB)
  Building wheels for collected packages: bcolz
    Building wheel for bcolz (setup.py): started
    Building wheel for bcolz (setup.py): finished with status 'error'
    error: subprocess-exited-with-error
    
    × python setup.py bdist_wheel did not run successfully.
    │ exit code: 1
    ╰─> [89 lines of output]
        SSE2 detected
        AVX2 detected
        running bdist_wheel
        running build
        running build_py
        creating build
        creating build/lib.linux-x86_64-3.7
        creating build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/chunked_eval.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/py2help.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/ctable.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/toplevel.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/arrayprint.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/attrs.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/version.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/utils.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/defaults.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/py2help_tests.py -> build/lib.linux-x86_64-3.7/bcolz
        copying bcolz/__init__.py -> build/lib.linux-x86_64-3.7/bcolz
        creating build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/common.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/test_queries.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/all.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/test_carray_objects.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/test_carray.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/test_attrs.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/test_ndcarray.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/test_ctable.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/tests/__init__.py -> build/lib.linux-x86_64-3.7/bcolz/tests
        copying bcolz/carray_ext.pxd -> build/lib.linux-x86_64-3.7/bcolz
        running build_ext
        Compiling bcolz/carray_ext.pyx because it changed.
        [1/1] Cythonizing bcolz/carray_ext.pyx
        /tmp/pip-install-e6qfw5hr/bcolz_9ba2781eef6f491cae7bfb67fa2e4f0e/.eggs/Cython-3.0.0-py3.7-linux-x86_64.egg/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-install-e6qfw5hr/bcolz_9ba2781eef6f491cae7bfb67fa2e4f0e/bcolz/carray_ext.pxd
          tree = Parsing.p_module(s, pxd, full_module_name)
        
        Error compiling Cython file:
        ------------------------------------------------------------
        ...
                # Create the final container and fill it
                out = carray([], dtype=newdtype, cparams=self.cparams,
                               expectedlen=newlen,
                               rootdir=rootdir, mode='w')
                if newlen < ilen:
                    rsize = isize / newlen
                                  ^
        ------------------------------------------------------------
        
        bcolz/carray_ext.pyx:1685:26: Cannot assign type 'double' to 'npy_intp'
        Traceback (most recent call last):
          File "<string>", line 36, in <module>
          File "<pip-setuptools-caller>", line 34, in <module>
          File "/tmp/pip-install-e6qfw5hr/bcolz_9ba2781eef6f491cae7bfb67fa2e4f0e/setup.py", line 234, in <module>
            cmdclass=LazyCommandClass(),
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/setuptools/__init__.py", line 144, in setup
            return distutils.core.setup(**attrs)
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/core.py", line 148, in setup
            dist.run_commands()
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/dist.py", line 966, in run_commands
            self.run_command(cmd)
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/dist.py", line 985, in run_command
            cmd_obj.run()
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/wheel/bdist_wheel.py", line 349, in run
            self.run_command("build")
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/cmd.py", line 313, in run_command
            self.distribution.run_command(command)
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/dist.py", line 985, in run_command
            cmd_obj.run()
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/command/build.py", line 135, in run
            self.run_command(cmd_name)
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/cmd.py", line 313, in run_command
            self.distribution.run_command(command)
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/dist.py", line 985, in run_command
            cmd_obj.run()
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/command/build_ext.py", line 340, in run
            self.build_extensions()
          File "/tmp/pip-install-e6qfw5hr/bcolz_9ba2781eef6f491cae7bfb67fa2e4f0e/setup.py", line 77, in build_extensions
            cython_build_ext.build_extensions(self)
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/command/build_ext.py", line 449, in build_extensions
            self._build_extensions_serial()
          File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/command/build_ext.py", line 474, in _build_extensions_serial
            self.build_extension(ext)
          File "/tmp/pip-install-e6qfw5hr/bcolz_9ba2781eef6f491cae7bfb67fa2e4f0e/.eggs/Cython-3.0.0-py3.7-linux-x86_64.egg/Cython/Distutils/build_ext.py", line 123, in build_extension
            ext,force=self.force, quiet=self.verbose == 0, **options
          File "/tmp/pip-install-e6qfw5hr/bcolz_9ba2781eef6f491cae7bfb67fa2e4f0e/.eggs/Cython-3.0.0-py3.7-linux-x86_64.egg/Cython/Build/Dependencies.py", line 1134, in cythonize
            cythonize_one(*args)
          File "/tmp/pip-install-e6qfw5hr/bcolz_9ba2781eef6f491cae7bfb67fa2e4f0e/.eggs/Cython-3.0.0-py3.7-linux-x86_64.egg/Cython/Build/Dependencies.py", line 1301, in cythonize_one
            raise CompileError(None, pyx_file)
        Cython.Compiler.Errors.CompileError: bcolz/carray_ext.pyx
        [end of output]
    
    note: This error originates from a subprocess, and is likely not a problem with pip.
    ERROR: Failed building wheel for bcolz
    Running setup.py clean for bcolz
  Failed to build bcolz
  ERROR: Could not build wheels for bcolz, which is required to install pyproject.toml-based projects

Version and installation information

Please provide the following:

• Value of petl.__version__: 1.7.12
• Version information for any third-party package dependencies that are relevant:
  • numpy>=1.7 ??
  • bcolz-1.2.1
• Version of Python interpreter: 3.7 and possibly later
• Operating system: ubuntu-latest
• How petl was installed:
  • CI: test-source-code (ubuntu-latest, 3.7)
  • requirements-optional.txt (line 14)