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setup.py
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setup.py
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from setuptools import setup
from subprocess import check_output, CalledProcessError
try:
num_gpus = len(check_output(['nvidia-smi', '--query-gpu=gpu_name',
'--format=csv']).decode().strip().split('\n'))
tf = 'tensorflow-gpu>1.1' if num_gpus > 1 else 'tensorflow'
except (CalledProcessError, FileNotFoundError):
tf = 'tensorflow>=1.1'
setup(
name='dietnet',
version='0.1',
description='A program to fit MLPs to high dimensional data',
author='Gokcen Eraslan',
author_email="goekcen.eraslan@helmholtz-muenchen.de",
packages=['dietnet'],
install_requires=[tf,
'numpy>=1.7',
'six>=1.10.0',
'plinkio', #for preprocessing
'pandas', #for preprocessing
'scikit-learn'], #only for k-fold and train/valid/test split
url='https://github.com/gokceneraslan/dietnet',
entry_points={
'console_scripts': [
'dietnet = dietnet.__main__:main'
]},
license='Apache License 2.0',
classifiers=['License :: OSI Approved :: Apache Software License',
'Topic :: Scientific/Engineering :: Bio-Informatics',
'Topic :: Scientific/Engineering :: Artificial Intelligence',
'Programming Language :: Python :: 2.7',
'Programming Language :: Python :: 3.5'],
)