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@LarsonLab UCSF Peder Larson Research Group

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    21 repositories

    • MRI-education-resources

      Public
      Resources for learning the principles of magnetic resonance imaging (MRI)
      mrimagnetic-resonance-imaging
      Jupyter Notebook
      •
      MIT License
      •30•109•9•0•Updated Nov 19, 2024Nov 19, 2024

    • RCC_CT_Curation

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Nov 1, 2024Nov 1, 2024

    • ilumr-courseware

      Public
      Courseware for the ilumr educational MRI system
      Jupyter Notebook
      •
      MIT License
      •6•0•3•0•Updated Oct 24, 2024Oct 24, 2024

    • hyperpolarized-mri-toolbox

      Public
      The goal of this toolbox is to provide open-source research-level and prototyping software tools for hyperpolarized MRI experiments. It is currently based on MATLAB/Octave code, and includes code for designing radiofrequency (RF) pulses, imaging gradients, data reconstruction, and data analysis. doi: 10.5281/zenodo.1198915
      mrirf-pulseskinetic-modelingmri-acquisitionmri-signalshyperpolarized-mri-experiments
      Jupyter Notebook
      •32•41•12•1•Updated Oct 18, 2024Oct 18, 2024

    • UCSF_Xenograft_MRI_Segmentation

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Sep 6, 2024Sep 6, 2024

    • LarsonLab.github.io

      Public
      Research group web site, with a focus on blog-style content
      JavaScript
      •
      MIT License
      •1•0•5•0•Updated Sep 3, 2024Sep 3, 2024

    • Spectral-Spatial-RF-Pulse-Design

      Public
      This package includes Matlab functions to design spectral-spatial RF pulses (also known as spatial-spectral RF pulses) for application to magnetic resonance spectroscopy and imaging
      MATLAB
      •
      BSD 3-Clause "New" or "Revised" License
      •19•24•2•0•Updated Jun 7, 2024Jun 7, 2024

    • Radial-Field-of-Views

      Public
      Radial sampling patterns in frequency space to support anisotropic field of views (FOVs) in the dual domain
      MATLAB
      •
      BSD 3-Clause "New" or "Revised" License
      •4•14•1•0•Updated Feb 28, 2024Feb 28, 2024

    • dnlinv

      Public
      Reconstruction code and reproducible reconstruction scripts for DNLINV paper
      mri-reconstructiondeep-image-priorself-supervised-learning
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•5•0•0•Updated Feb 14, 2024Feb 14, 2024

    • LongT2-Suppression-Pulses

      Public
      Long-T2 suppression RF pulses for MRI of short and ultrashort T2 components
      MATLAB
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Jan 24, 2024Jan 24, 2024

    • SuperStimulatedEchoes

      Public
      MATLAB
      •0•0•0•0•Updated Aug 30, 2023Aug 30, 2023

    • UTEMRI_Brain

      Public
      Processing ultrashort echo time (UTE) MRI data in the Brain
      Jupyter Notebook
      •5•8•2•0•Updated Feb 8, 2023Feb 8, 2023

    • test_book

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Oct 2, 2021Oct 2, 2021

    • enlive

      Public
      Calibrationless Parallel MRI with ENLIVE
      Jupyter Notebook
      •7•0•0•0•Updated Jun 21, 2021Jun 21, 2021

    • dworkLib

      Public
      Useful utilities
      MATLAB
      •6•0•0•0•Updated Sep 28, 2020Sep 28, 2020

    • LarsonLab-swlist

      Public
      Larson Lab Software List
      1•1•0•0•Updated Feb 5, 2019Feb 5, 2019

    • Flip-Angle-Design-Toolbox

      Public
      Tools for designing optimal flip angle schemes for hyperpolarized carbon-13 MRI
      MATLAB
      •6•0•0•0•Updated Dec 20, 2018Dec 20, 2018

    • UTE_Registration

      Public
      Registration code for UTE data
      MATLAB
      •0•0•0•0•Updated Jul 27, 2018Jul 27, 2018

    • mripy

      Public
      A python based MRI reconstruction toolbox with compressed sensing, parallel imaging and machine-learning functions
      Python
      •51•11•0•0•Updated Feb 7, 2018Feb 7, 2018

    • UTE-signal-processing

      Public
      MATLAB
      •1•0•0•0•Updated Sep 24, 2017Sep 24, 2017

    • UTE-nipype

      Public
      Primitive pipeline for imaging UTE MRI data using Nipype
      Jupyter Notebook
      •1•1•0•0•Updated Sep 4, 2017Sep 4, 2017