Update protomer hessian dataset to use new create_basic_dataset #90
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
--- | |
# test lifecycle processing | |
name: Test lifecycle | |
on: | |
pull_request: | |
branches: | |
- master | |
types: | |
- labeled | |
workflow_dispatch: | |
defaults: | |
run: | |
shell: bash -l {0} | |
jobs: | |
test-lifecycle: | |
if: contains(github.event.pull_request.labels.*.name, 'test-ci') | |
runs-on: ubuntu-latest | |
env: | |
OE_LICENSE: ${{ github.workspace }}/oe_license.txt | |
steps: | |
- name: Checkout code | |
uses: nschloe/action-cached-lfs-checkout@v1 | |
- name: ensure we only have one instance running | |
uses: softprops/turnstyle@master | |
env: | |
GITHUB_TOKEN: ${{ secrets.GH_DANGERBOT_TOKEN_LIMITED }} | |
with: | |
abort-after-seconds: 60 | |
- name: Additional info about the build | |
run: | | |
uname -a | |
df -h | |
ulimit -a | |
- name: Install environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: devtools/conda-envs/queued-submit.yaml | |
create-args: >- | |
python=3.11 | |
cache-environment: true | |
- name: Environment Information | |
run: | | |
conda info | |
conda list | |
- name: Make oe_license.txt file from GH org secret "OE_LICENSE" | |
env: | |
OE_LICENSE_TEXT: ${{ secrets.OE_LICENSE }} | |
run: | | |
echo "${OE_LICENSE_TEXT}" > ${OE_LICENSE} | |
- name: Run lifecycle processing script | |
env: | |
GH_TOKEN: ${{ secrets.QCA_DATASET_SUBMISSION_PAT }} | |
QCA_USER: ${{ secrets.QCA_USER }} | |
QCA_KEY: ${{ secrets.QCA_KEY }} | |
run: | | |
python ./management/lifecycle-v2.py --run-tests |