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findStoichConsistentSubset error in minCardinalityConservationRelaxationVector #2337

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Gpreciat opened this issue Oct 3, 2024 · 0 comments
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@Gpreciat
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Gpreciat commented Oct 3, 2024

Error using optimizeCardinality
mosek not working with optCard -TODO debug with testOptimizeCbModel

Error in minCardinalityConservationRelaxationVector (line 112)
solutionRelax = optimizeCardinality(cardProblem,param);

Error in findStoichConsistentSubset (line 324)
[relaxRxnBool,solutionRelax] = minCardinalityConservationRelaxationVector(model.S(boolMet,boolRxn),minCardRelaxParams,printLevel-1);

Error in XomicsToModel (line 796)
[~, ~, ~, ~, ~, ~, model, stoichConsistModel] = findStoichConsistentSubset(model, ...

Error in XomicsToMultipleModels (line 380)
[omicsModel, modelGenerationReport] = XomicsToModel(genericModel, specificData, param);

Error in driver_createMultipleIDNModels (line 163)
directoriesWithModels = XomicsToMultipleModels(modelGenerationConditions, param);

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  • Tried to solve the issue on my own
  • Retried to run my code with the latest version of The COBRA Toolbox
  • Checked that a similar issue has not already been opened

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