From 3e64c28e4f02acea127a629d178a552ce24db93d Mon Sep 17 00:00:00 2001
From: Danilo Di Leo <danilo.dileo@lnu.se>
Date: Mon, 23 Oct 2023 10:38:00 +0200
Subject: [PATCH] multiqc report printed in results/multiqc

---
 conf/modules.config | 6 +-----
 1 file changed, 1 insertion(+), 5 deletions(-)

diff --git a/conf/modules.config b/conf/modules.config
index c9c1d950..6702120a 100644
--- a/conf/modules.config
+++ b/conf/modules.config
@@ -381,11 +381,7 @@ process {
         publishDir = [
             path: "${params.outdir}/multiqc",
             mode: 'copy',
-            saveAs: { filename -> filename.equals('versions.yml') ? null : filename },
-            path: "${params.outdir}/summary_tables",
-            mode: 'copy',
-            pattern: '*.html',
-            saveAs: { filename -> "${params.assembler}.${params.orf_caller}.multiqc_report.html" }
+            saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
         ]
     }
 }