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Building software on compute nodes #146
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@pmenstrom, I can't view tickets in the new Jira, can you please include a screenshot of the most relevant portion of the discussion? |
The user thought the compile wasn't working, I had him watch for files in his temp directory and he saw them being created and increasing in size. I responded: Peter Enstrom: Yeah, I think that it is working but just taking a long time. You can get more power on a compute node instead of sharing with everyone else on the login node. If you use srun to start an interactive job you will start a shell on a compute node and it will have access to all of the same files and your home directory. Deep Chatterjee: Need to signoff for the day, but I wanted to point out that the max disk usage of the build below, following my comment was 17G 17G /scratch/bcse/deep1018/build-temp-2864596409 And the build did proceed, albeit taking way long time. However, it still does not explain the 26G limit on the tmpfs partition giving a space error. It will be good to investigate the same. Peter Enstrom: I am thinking that there might be some intermediary files? Deep Chatterjee: I am letting you know that re-trying the builds on a compute node work without issues with the default APPTAINER_TMPDIR i.e. /tmp. Also, takes less time (or at least as much time that I had seen prior to I hit the error, when I created this issue). So I am happy to mark this as resolved. But wanted to suggest that it will be nice to have this suggestion of trying the build on a compute node be added to the Delta documentation. Many thanks for you help. |
I am not sure if the documentation mentions that for large, compute intensive compilations the users are probably better off compiling their code on a compute node. In ticket SUP-6253 the user's compilation was much faster on a compute node.
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