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pod5 merge finished without errors at 73% #148

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SimonaSecomandi opened this issue Oct 16, 2024 · 1 comment
Open

pod5 merge finished without errors at 73% #148

SimonaSecomandi opened this issue Oct 16, 2024 · 1 comment

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@SimonaSecomandi
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Issue Description

I run the following command which finished successfully but the log says it merged 53 out of 73 files (73%).

pod5 merge -t 32 pod5/*.pod5 -o pod5merged/PAQ83015_bd9104da_d74a1b29.pod5

Logs

Merging reads from 73 files
Merging: 73%|#######2 | 53/73 [18:12<06:52, 20.61s/File]

Specifications

  • Pod5 Version: 0.3.15
  • Python Version: 3.12.3
@arturotorreso
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The same thing happens to me, but it's actually processing all the files. It's probably something with the progress bar (always with the last 20 files).

Check here for more info: #131

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