diff --git a/scripts/cellranger_config.py b/scripts/cellranger_config.py index e4e6105..c41c53e 100644 --- a/scripts/cellranger_config.py +++ b/scripts/cellranger_config.py @@ -50,7 +50,7 @@ # 10X recipe list for different pipelines COUNT_FLAVORS = ["SC_Chromium-GEX-3", "SC_Chromium-GEX-5"] VDJ_FLAVORS = ["SC_Chromium-TCR", "SC_Chromium-BCR"] -ARC_FLAVORS = ["SC_Chromium-Multiome", "SC_Chromium-Multiome_ATAC", "SC_Chromium-Multiome_GEX"] +ARC_FLAVORS = ["SC_Chromium-Multiome", "SC_Chromium-Multiome-ATAC", "SC_Chromium-Multiome-GEX"] SPATIAL_FLAVORS = ["ST_Visium"] # we do not want to PROCESS SAIL (15500) or SCRI (12437) projects