docker-compose.yml

# this will start latest snapshot using /data as store
# NOTE: WHEN USING DOCKER YOU CANNOT DYNAMICALLY MANAGE YOUR PROFILES
version: "3.4"
services:
  # activate this profile by adding --profile armadillo to the `docker-compose --profile armadillo up`
  armadillo:
    image: molgenis/molgenis-armadillo-snapshot:latest
    environment:
      LOGGING_CONFIG: 'classpath:logback-file.xml'
      AUDIT_LOG_PATH: '/app/logs/audit.log'
      SPRING_SECURITY_USER_PASSWORD: 'admin'
    #  TODO add all settings we generally use
    #  SPRING_SECURITY_OAUTH2_RESOURCESERVER_JWT_ISSUER_URI: 'https://auth.molgenis.org'
    #  SPRING_SECURITY_OAUTH2_RESOURCESERVER_OPAQUETOKEN_CLIENT_ID: 'b396233b-cdb2-449e-ac5c-a0d28b38f791'
    ports:
      - 8080:8080
    volumes:
      - ${PWD}/logs/:/app/logs
      - ${PWD}/data/:/data
      - /var/run/docker.sock:/var/run/docker.sock

#  rserver:
#    image: datashield/armadillo-rserver:6.2.0
#    environment:
#      DEBUG: "FALSE"
#    ports:
#      # host port: container port
#      - 6311:6311