fix dot

milaboratory · Feb 20, 2024 · 5652995 · 5652995
1 parent 0858866
commit 5652995
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/build.gradle.kts b/build.gradle.kts
@@ -134,7 +134,7 @@ val toObfuscate: Configuration by configurations.creating {
 val obfuscationLibs: Configuration by configurations.creating
 
 
-val mixcrAlgoVersion = "4.6.0-48-rework_analyze"
+val mixcrAlgoVersion = "4.6.0-49-rework_analyze"
 // may be blank (will be inherited from mixcr-algo)
 val milibVersion = ""
 // may be blank (will be inherited from mixcr-algo or milib)

diff --git a/src/main/kotlin/com/milaboratory/mixcr/cli/CommandAnalyze.kt b/src/main/kotlin/com/milaboratory/mixcr/cli/CommandAnalyze.kt
@@ -370,7 +370,8 @@ object CommandAnalyze {
                     this += extraAlignArgs
                     this += mixins.flatMap { it.cmdArgs }
                     this += pathsForNotAligned.argsForAlign()
-                    this += listOf("--output-name-suffix", "alignments")
+                    if (outputNamePrefix.isBlank())
+                        this += listOf("--output-name-suffix", "alignments")
                 }
             }