Merge pull request #1525 from milaboratory/mixcr-regression-tests/fixes

Regression tests changes in the fixes
milaboratory · Feb 7, 2024 · 27f9d0e · 27f9d0e
2 parents a045aab + 04ca1b9
commit 27f9d0e
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diff --git a/regression/reports/baseBuldTrees.yaml b/regression/reports/baseBuldTrees.yaml
@@ -973,6 +973,8 @@ upstreams:
             nonFunctional: 37
             isOOF: 32
             hasStops: 5
+      clonesFilteredInFineFiltering: 0
+      readsFilteredInFineFiltering: 0.0
       clonesFilteredInPostFiltering: 0
       readsFilteredInPostFiltering: 0.0
       postFilteringReports: null
@@ -1883,6 +1885,8 @@ upstreams:
             nonFunctional: 1
             isOOF: 1
             hasStops: 0
+      clonesFilteredInFineFiltering: 0
+      readsFilteredInFineFiltering: 0.0
       clonesFilteredInPostFiltering: 0
       readsFilteredInPostFiltering: 0.0
       postFilteringReports: null

diff --git a/regression/reports/baseSingleCell.raw.yaml b/regression/reports/baseSingleCell.raw.yaml
@@ -206,6 +206,8 @@ assemble:
         nonFunctional: 0
         isOOF: 0
         hasStops: 0
+  clonesFilteredInFineFiltering: 0
+  readsFilteredInFineFiltering: 0.0
   clonesFilteredInPostFiltering: 0
   readsFilteredInPostFiltering: 0.0
   postFilteringReports:

diff --git a/regression/reports/baseSingleCell.vdjcontigs.yaml b/regression/reports/baseSingleCell.vdjcontigs.yaml
@@ -207,6 +207,8 @@ assemble:
         nonFunctional: 0
         isOOF: 0
         hasStops: 0
+  clonesFilteredInFineFiltering: 0
+  readsFilteredInFineFiltering: 0.0
   clonesFilteredInPostFiltering: 0
   readsFilteredInPostFiltering: 0.0
   postFilteringReports:

diff --git a/regression/schemas/reports/CloneAssemblerReport.schema.yaml b/regression/schemas/reports/CloneAssemblerReport.schema.yaml
@@ -168,6 +168,8 @@ properties:
     type: integer
   clonesDroppedAsLowQuality:
     type: integer
+  clonesFilteredInFineFiltering:
+    type: integer
   clonesFilteredInPostFiltering:
     type: integer
   clonesPreClustered:
@@ -268,6 +270,8 @@ properties:
     type: integer
   readsDroppedWithLowQualityClones:
     type: integer
+  readsFilteredInFineFiltering:
+    type: number
   readsFilteredInPostFiltering:
     type: number
   readsInClones: