JSON file from Illumina Nirvana

[NourMarzouka]

I wonder if there is any plan to add an import option for the annotated JSON file from the free open-source Nirvana tool?
It is faster than VEP but the issue is the output format is a JSON file only.

[dridk]

could you give me the file specification?

[dridk]

this is a good idea. Lets do it

[NourMarzouka]

Sure!
Nirvana JSON File Format Documentation
https://illumina.github.io/NirvanaDocumentation/file-formats/nirvana-json-file-format

[dridk]

Really interesting format. I will add as issue for the next release . Dr Sacha Schutz médecine / génétique moléculaire Bioinformatique [Clef plublic GPG](http://keys.gnupg.net/pks/lookup?op=get&search=0x214A030FFE54058C) dridk.me [My github](https://github.com/)

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-------- Message d'origine -------- Le 21 avr. 2022 à 13:48, Nour-al-dain Marzouka a écrit :

Sure! Nirvana JSON File Format Documentation https://illumina.github.io/NirvanaDocumentation/file-formats/nirvana-json-file-format — Reply to this email directly, [view it on GitHub](#388 (comment)), or [unsubscribe](https://github.com/notifications/unsubscribe-auth/AAOSSFZ43MZBOPZS2HVRM5DVGE6A7ANCNFSM5T65Q3MA). You are receiving this because you commented.Message ID: ***@***.***>