Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Master list #7

Open
5 of 7 tasks
haranrk opened this issue Oct 29, 2019 · 1 comment
Open
5 of 7 tasks

Master list #7

haranrk opened this issue Oct 29, 2019 · 1 comment

Comments

@haranrk
Copy link
Collaborator

haranrk commented Oct 29, 2019

Paper skeleton

Abstract

  • Model performance on datasets (Liver, Colon, Prostrate(maybe))
  • Main content of the paper

Introduction

  1. Motivation
    1. Include why
    2. Pathologists aren’t accurate and slow
  2. Previous work
    1. Papers (at least 10)
  3. Our contribution in brief

Methodology

Data

  • Explain all 3 datasets

Sampling strategies

Currently, doing equal tumor and normal tissue sampling

  • Some paper - prostrate cancer - deepmind/googleai - use a different ratio investigate

  • Sampling randomly? Or visit some papers on sampling,

Data pre-processing

Stain normalisation

  • Augmentations

Network architectures

  • Explain 3 architectures in detail

Training strategies

Inference strategies

Interpretability

  • Data flow analysis - gradcam
  • Uncertainty analysis -

Results & Discussion

Implementation details

Conclusion

Future work

Acknowledgements

@haranrk
Copy link
Collaborator Author

haranrk commented Oct 29, 2019

Experiments to run

  • 9-way ensemble
  • Color-jitter vs Stain normalisation
  • Interpretability - uncertainty
  • Interpretability - gradcam
  • Check transfer learning between the Histopathology domains

@haranrk haranrk mentioned this issue Oct 29, 2019
3 tasks
@haranrk haranrk pinned this issue Oct 29, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant