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Improve genome visualisation module #4

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8 tasks
js51 opened this issue Jun 9, 2021 · 1 comment
Open
8 tasks

Improve genome visualisation module #4

js51 opened this issue Jun 9, 2021 · 1 comment
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enhancement New feature or request help wanted Extra attention is needed

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@js51
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js51 commented Jun 9, 2021

This was thrown together quite quickly and could do with some improvements:

  • More options for representing genomes (currently they need to be converted to a position paradigm (reg->pos) list
  • Option to save image files with transparency
  • Option to move arrows to the ends of each region
  • Option to have a gap instead of a line separating regions
  • TikZ output (probably a complete rewrite)
  • Option to change output size
  • Label sizing options
  • Export images that inherit fonts from LaTeX document rather than using embedded ones #31
@js51 js51 added the enhancement New feature or request label Jun 9, 2021
@js51 js51 assigned js51 and unassigned js51 Jun 23, 2021
@js51 js51 changed the title Improve genome drawing module Improve genome visualisation module Jun 24, 2021
@js51
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js51 commented Jun 24, 2021

I also hear that networkx has some interactive visualisations. Could be fun!

@js51 js51 added the help wanted Extra attention is needed label Jul 9, 2021
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Labels
enhancement New feature or request help wanted Extra attention is needed
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