From 6cac85cc7b0ee0ab18fc7b7b83610d87ec815688 Mon Sep 17 00:00:00 2001
From: Jack Leary <j.leary@ufl.edu>
Date: Fri, 17 Nov 2023 10:42:58 -0500
Subject: [PATCH] tweaked README

---
 README.Rmd | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/README.Rmd b/README.Rmd
index a3cf586..ec42ec6 100644
--- a/README.Rmd
+++ b/README.Rmd
@@ -115,7 +115,8 @@ scLANE_models_glm <- testDynamic(sim_data,
                                  pt = order_df, 
                                  genes = gene_sample, 
                                  size.factor.offset = cell_offset, 
-                                 n.cores = 4)
+                                 n.cores = 4, 
+                                 verbose = FALSE)
 ```
 
 After the function finishes running, we use `getResultsDE()` to generate a sorted table of DE test results, with one row for each gene & lineage. The GLM mode uses a simple likelihood ratio test to compare the null & alternate models, with the test statistic assumed to be [asymptotically Chi-squared distributed](https://en.wikipedia.org/wiki/Likelihood-ratio_test).