requirements_conda.txt

absl-py==0.12.0
astor==0.8.1
attrs==20.3.0
autograd==1.3
autograd-gamma==0.5.0
bio==0.1.4
biopython==1.78
cached-property==1.5.2
certifi==2020.11.8
cffi==1.14.4
chardet==3.0.4
cycler==0.10.0
Cython==0.28.6
decorator==4.4.2
formulaic==0.2.1
future==0.18.2
gast==0.4.0
gensim==3.8.3
h5py==3.1.0
idna==2.10
importlib-metadata==3.3.0
iniconfig==1.1.1
interface-meta==1.2.2
Jinja2==2.11.2
joblib>=0.17.0
Keras-Applications==1.0.8
Keras-Preprocessing==1.1.2
kiwisolver==1.3.1
lifelines>=0.25.7
lightgbm>=2.3.0
Markdown==3.3.4
MarkupSafe==1.1.1
matplotlib>=2.2.2
mock==4.0.3
networkx>=2.1
node2vec>=0.3.3
numpy>=1.19.5
packaging==20.8
pandas>=1.1.5
Pillow==8.1.0
pluggy==0.13.1
protobuf==3.15.8
psutil==5.6.7
py==1.10.0
pyaml==20.4.0
pycparser==2.20
pygosemsim>=0.1.0
pyparsing==2.4.7
pytest==6.2.1
python-dateutil==2.8.1
pytz==2020.4
PyYAML==5.4.1
requests==2.25.0
rpy2>=3.4.2
scikit-learn>=0.24.2
scikit-optimize==0.8.1
scipy>=1.5.4
seaborn>=0.11.0
Send2Trash==1.5.0
sentencepiece==0.1.94
seqvec==0.4.1
scons==3.1.2
six==1.15.0
smart-open==4.0.0
tensorflow-estimator==1.13.0
threadpoolctl==2.1.0
toml==0.10.2
tqdm==4.53.0
typing-extensions==3.7.4.3
tzlocal==2.1
urllib3==1.26.2
virtualenv==15.1.0
wrapt==1.12.1
zipp==3.4.0

sklearn>=0.0
glmnet>=2.1.1
tmap>=1.0.4
faerun>=0.3.20
tensorflow>=1.13.1
torch>=1.7.0
obonet>=0.2.6
goscripts>=1.0
dill>=0.3.4