From ff5eb34ebfa7e15c6b6e5e35887cc694dde70903 Mon Sep 17 00:00:00 2001
From: Federico Marini <marinif@uni-mainz.de>
Date: Wed, 2 Oct 2024 22:00:59 +0200
Subject: [PATCH] adding another yaml, "just for the fun" and for showing a
 proof of principle that this could simply work

---
 inst/tonsils_example/tonsil_and_mix.yml | 48 +++++++++++++++++++++++++
 1 file changed, 48 insertions(+)
 create mode 100644 inst/tonsils_example/tonsil_and_mix.yml

diff --git a/inst/tonsils_example/tonsil_and_mix.yml b/inst/tonsils_example/tonsil_and_mix.yml
new file mode 100644
index 0000000..a9e30fc
--- /dev/null
+++ b/inst/tonsils_example/tonsil_and_mix.yml
@@ -0,0 +1,48 @@
+datasets:
+  - id: Tonsil_epithelial
+    title: Tonsil Data - Epithelial
+    uri: runr://HCATonsilData::HCATonsilData(assayType = "RNA", cellType = "epithelial")
+    description: |
+        Tonsil Data - Epithelial, 396 cells
+
+        <p align="center">
+        <img src="https://github.com/Bioconductor/BiocStickers/blob/devel/iSEE/iSEE.png?raw=true" alt="" height = "150"/>
+        </p>
+  - id: ReprocessedAllenData
+    title: ReprocessedAllenData
+    uri: https://zenodo.org/record/8076991/files/ReprocessedAllenData.rds
+    description: |
+        Reprocessed Allen Data.
+  - id: BuettnerESCData
+    title: BuettnerESCData
+    uri: https://zenodo.org/record/8076991/files/BuettnerESCData.rds
+    description: |
+        Reprocessed Allen Data (copy).
+initial:
+  - id: Tonsil_epithelial_full5
+    datasets:
+      - Tonsil_epithelial
+    title: Tonsil_epithelial configuration 1 (R call)
+    uri: rcall://system.file(package='iSEEindex','tonsils_example/hca_tonsil_epithelial_v2.R')
+    # uri: localhost:///Users/fede/Development/iSEEindex/hca_tonsil_epithelial_v2.R
+    # uri: rcall://system.file(package='iSEEindex','ReprocessedAllenData_config_01.R')
+    description: |
+      touring around, first go
+  - id: config01rcall
+    datasets:
+      - ReprocessedAllenData
+    title: Example configuration 1 (R call)
+    uri: rcall://system.file(package='iSEEindex','ReprocessedAllenData_config_01.R')
+    description: |
+      One `ReducedDimensionPlot` panel, one `ColumnDataTable` panel.
+
+      File distributed with the `iSEEindex` package.
+  - id: config02rcall
+    datasets:
+      - ReprocessedAllenData
+    title: Example configuration 2 (R call)
+    uri: rcall://system.file(package='iSEEindex','ReprocessedAllenData_config_02.R')
+    description: |
+      One `RowDataTable` panel, one `ColumnDataTable` panel.
+
+      File distributed with the `iSEEindex` package.