Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Error when loading the BSgenome with the latest EaCoN #26

Open
chshangy opened this issue Feb 16, 2022 · 1 comment
Open

Error when loading the BSgenome with the latest EaCoN #26

chshangy opened this issue Feb 16, 2022 · 1 comment
Assignees
Labels
bug Something isn't working

Comments

@chshangy
Copy link

Hello, I updated my EaCoN package to process the WES data and got the following error message:
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function ‘metadata’ for signature ‘"BSgenome"’

I tried to run the my previous command with OncoScan data which was fine when I used the older version EaCoN, but got the same error message this time, with the newest EaCoN

I tried to install the EaCoN in another machine and got the same error.

Any idea to fix this?
Thank you very much!

@aoumess
Copy link
Collaborator

aoumess commented Feb 16, 2022

Hi !

BSgenome changed its way to access some metadata. Up to now, it was just giving out a warning, it seems that now it has moved to an error. I'll fix it soon !

Regards,

Bastien

@aoumess aoumess self-assigned this Feb 16, 2022
@aoumess aoumess added the bug Something isn't working label Feb 16, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

2 participants