Update cross key to get bamFilesToTranscriptome and bamStatsFiles - f…

…ixes #72
guigolab · May 16, 2023 · ae1ecc6 · ae1ecc6
1 parent 1c8cf1d
commit ae1ecc6
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/grape-pipeline.nf b/grape-pipeline.nf
@@ -624,7 +624,7 @@ inferExpOutput.into {
     bamFilesToGenome
 }
 
-bamFilesToTranscriptome.cross(bamFilesCrossTranscriptome).map { transcriptome, genome ->
+bamFilesToTranscriptome.cross(bamFilesCrossTranscriptome, { it[1] + it[0] }).map { transcriptome, genome ->
     transcriptome[0..-2] + genome[-2..-1]
 }.into {
     bamFilesToTranscriptome
@@ -665,7 +665,7 @@ process bamStats {
     template(command)
 }
 
-bamStatsOutput.cross(bamFilesCrossBamStats).map { stats, genome ->
+bamStatsOutput.cross(bamFilesCrossBamStats, { it[1] + it[0] }).map { stats, genome ->
     stats + genome[-1]
 }.set {
     bamStatsFiles