From 1eb72aa68c8fa111854e1ad74815fa2aac69f8b1 Mon Sep 17 00:00:00 2001
From: Toni Hermoso Pulido <toniher@cau.cat>
Date: Tue, 17 Mar 2020 17:16:16 +0100
Subject: [PATCH] Fix

---
 main_configuration.config | 2 +-
 pipeline.nf               | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/main_configuration.config b/main_configuration.config
index e81e7e1..14766db 100644
--- a/main_configuration.config
+++ b/main_configuration.config
@@ -6,7 +6,7 @@ params {
  evalue = "0.00001"
  blastFile = ""
  diamond = "false"
- blastDbpath = "/nfs/db/ncbi/201908/blastdb/db/nr"
+ blastDbPath = "/nfs/db/ncbi/201908/blastdb/db/nr"
  speciesName = "P.vulgaris"
  chunkSize = 25
  chunkWebSize = 100
diff --git a/pipeline.nf b/pipeline.nf
index b6fd744..b2c9019 100644
--- a/pipeline.nf
+++ b/pipeline.nf
@@ -114,7 +114,7 @@ log.info "General parameters"
 log.info "------------------"
 log.info "Protein sequence file        : ${params.proteinFile}"
 log.info "Annotation file              : ${params.gffFile}"
-if ( ${params.blastFile} != "" ) {
+if ( params.blastFile != "" ) {
 log.info "BLAST results file           : ${params.blastFile}"
 }
 log.info "Species name                  : ${params.speciesName}"