From 98d1c3611c762337bc41aa2b6b7687fc4ffe8ecc Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" Date: Tue, 5 Nov 2024 14:36:24 +0000 Subject: [PATCH] chore(docs): render docs --- docs/_reference/analysis.html | 6 ++ docs/_reference/cmd.html | 6 ++ docs/_reference/config.html | 6 ++ docs/_reference/constants.html | 6 ++ docs/_reference/coordinates.html | 6 ++ .../dummyreaction.reaction.DummyReaction.html | 6 ++ .../hat_naive.reaction.NaiveHAT.html | 6 ++ .../homolysis.reaction.Homolysis.html | 6 ++ docs/_reference/index.html | 6 ++ docs/_reference/kmc.html | 6 ++ docs/_reference/parsing.TopologyDict.html | 6 ++ docs/_reference/parsing.html | 6 ++ docs/_reference/plugins.html | 6 ++ docs/_reference/recipe.html | 6 ++ docs/_reference/runmanager.html | 6 ++ docs/_reference/schema.html | 6 ++ docs/_reference/tasks.html | 6 ++ docs/_reference/tools.html | 6 ++ docs/_reference/topology.atomic.html | 6 ++ docs/_reference/topology.ff.html | 6 ++ docs/_reference/topology.topology.html | 6 ++ docs/_reference/topology.utils.html | 6 ++ docs/_reference/utils.html | 6 ++ docs/guide/explanation/components.html | 6 ++ docs/guide/explanation/index.html | 10 ++- docs/guide/explanation/topology.html | 6 ++ docs/guide/how-to/analyze.html | 8 +- docs/guide/how-to/contribute.html | 6 ++ docs/guide/how-to/examples.html | 6 ++ docs/guide/how-to/hcp.html | 6 ++ docs/guide/how-to/index.html | 18 ++-- docs/guide/how-to/install-ml-plugins.html | 6 ++ docs/guide/how-to/reaction_only.html | 6 ++ docs/guide/references/cmd_ref.html | 6 ++ docs/guide/references/input.html | 6 ++ docs/guide/tutorials/colbuilder.html | 6 ++ docs/guide/tutorials/getting-started.html | 8 +- docs/guide/tutorials/index.html | 14 ++- docs/guide/tutorials/modify-topology.html | 10 ++- docs/guide/tutorials/write-plugin.html | 6 ++ docs/index.html | 13 +-- docs/search.json | 2 +- docs/sitemap.xml | 82 +++++++++--------- docs/www/favicon.png | Bin 37303 -> 36940 bytes 44 files changed, 305 insertions(+), 64 deletions(-) diff --git a/docs/_reference/analysis.html b/docs/_reference/analysis.html index 80720db8..d94ee7d9 100644 --- a/docs/_reference/analysis.html +++ b/docs/_reference/analysis.html @@ -66,6 +66,7 @@ + @@ -187,6 +188,11 @@