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--frag-len and --frag-len-sd of wafergen-scrna #146

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GIS-liuxl opened this issue Mar 13, 2018 · 0 comments
Open

--frag-len and --frag-len-sd of wafergen-scrna #146

GIS-liuxl opened this issue Mar 13, 2018 · 0 comments

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@GIS-liuxl
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Dear RPD,

I was wandering:

  1. how --frag-len and --frag-len-sd are used in wafergen-scrna (if I don't do dedup).
  2. How big difference will be caused if my fragment length is 300 and I use 200 (default) in the pipeline. (Keep sd 20 default),

bless~
Xingliang

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