-
Notifications
You must be signed in to change notification settings - Fork 17
/
codemeta.json
152 lines (152 loc) · 5.36 KB
/
codemeta.json
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
{
"@context": "https://w3id.org/codemeta/3.0",
"type": "SoftwareSourceCode",
"applicationCategory": "Biology",
"author": [
{
"id": "https://orcid.org/ 0000-0002-0220-0482",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics HUB, Paris, France "
},
"email": "bneron@pasteur.fr",
"familyName": "Néron",
"givenName": "Bertrand"
},
{
"id": "https://orcid.org/ 0000-0002-5231-3346",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": " Univ. Grenoble Alpes, CNRS, UMR 5525, VetAgro Sup, Grenoble INP, TIMC, 38000 Grenoble, France "
},
"email": "sophie.abby@univ-grenoble-alpes.fr",
"familyName": "Abby",
"givenName": "Sophie"
},
{
"id": "https://orcid.org/ 0000-0001-7704-822X",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, CNRS UMR3525, Microbial Evolutionary Genomics, Paris, France"
},
"email": "erocha@pasteur.fr",
"familyName": "Rocha",
"givenName": "Eduardo"
}
],
"codeRepository": "https://github.com/gem-pasteur/macsyfinder",
"contributor": [
{
"id": "https://orcid.org/ 0000-0002-7552-1009",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics HUB, Paris, France "
},
"email": "hmenager@pasteur.fr",
"familyName": "Ménager",
"givenName": "Hervé"
},
{
"id": "https://github.com/fjossandon",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Biome Makers Inc."
},
"email": "fco.j.ossandon@gmail.com",
"familyName": "Ossandon",
"givenName": "Franscisco J,"
},
{
"id": "https://orcid.org/0000-0003-2277-689X",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "APC Microbiome Institute: Cork, IE "
},
"familyName": "Denise",
"givenName": "Rémi"
},
{
"id": "https://orcid.org/ 0000-0001-7389-447X",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, CNRS UMR3525, Microbial Evolutionary Genomics, Paris, France"
},
"email": "mtouchon@pasteur.fr",
"familyName": "Touchon",
"givenName": "Marie"
},
{
"id": "https://orcid.org/ 0000-0003-4797-6185",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, CNRS UMR3525, Microbial Evolutionary Genomics, Paris, France"
},
"email": "aperrin@pasteur.fr",
"familyName": "Perrin",
"givenName": "Amandine"
},
{
"id": "https://orcid.org/ 0000-0002-0930-8920",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, SeqBio, Paris, France "
},
"email": "yoann.dufresne@pasteur.fr",
"familyName": "Dufresne",
"givenName": "Yoann"
},
{
"id": "https://github.com/TrellixVulnTeam",
"type": "Person",
"email": "charles.mcfarland@trellix.com",
"givenName": "TrellixVulnTeam"
}
],
"dateCreated": "2013-11-04",
"dateModified": "2024-07-30",
"datePublished": "2014-10-17",
"description": "MacSyFinder is a program to model and detect macromolecular systems, genetic pathways… in prokaryotes protein datasets.",
"downloadUrl": "https://pypi.org/project/MacSyFinder/",
"funder": {
"type": "Organization",
"name": "Institut Pasteur Paris"
},
"keywords": [
"bioinformatics",
"functional genomics",
"gene functional annotation"
],
"license": "https://spdx.org/licenses/GPL-3.0+",
"name": "macsyfinder",
"operatingSystem": [
"Linux",
"BSD",
"macOS"
],
"programmingLanguage": "Python",
"relatedLink": [
"https://pypi.org/project/MacSyFinder/",
"https://hub.docker.com/r/gempasteur/macsyfinder"
],
"softwareRequirements": [
"Python >= 3.10",
"hmmer >= 3.1"
],
"version": "2.1.4",
"codemeta:contIntegration": {
"id": "https://github.com/gem-pasteur/macsyfinder/actions"
},
"continuousIntegration": "https://github.com/gem-pasteur/macsyfinder/actions",
"developmentStatus": "active",
"issueTracker": "https://github.com/gem-pasteur/macsyfinder/issues",
"referencePublication": "https://doi.org/10.24072/pcjournal.250"
}