feat: add inclusion of "NT" prefixed refseq accessions to hgvs tools … #55
Workflow file for this run
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name: Upload tagged commit to PyPI | |
on: | |
push: | |
tags: | |
- "*.*.**" | |
jobs: | |
get_branch: | |
runs-on: ubuntu-latest | |
outputs: | |
branch_name: ${{ steps.get_branch_name.outputs.name }} | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Get branch name | |
id: get_branch_name | |
run: | | |
raw=$(git branch -r --contains ${{ github.ref }}) | |
branch=$(echo "$raw" | grep "origin/main" | sed "s|origin/||" | xargs) | |
echo "name=$branch" >> "$GITHUB_OUTPUT" | |
build: | |
name: Build distribution | |
runs-on: ubuntu-latest | |
needs: get_branch | |
if: needs.get_branch.outputs.branch_name == 'main' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python | |
uses: actions/setup-python@v4 | |
with: | |
python-version: "3.x" | |
- name: Install pypa/build | |
run: >- | |
python3 -m | |
pip install | |
build | |
--user | |
- name: Build a binary wheel and a source tarball | |
run: python3 -m build | |
- name: Store the distribution packages | |
uses: actions/upload-artifact@v3 | |
with: | |
name: python-package-distributions | |
path: dist/ | |
publish-to-pypi: | |
name: >- | |
Publish Python distribution to PyPI | |
needs: | |
- build | |
runs-on: ubuntu-latest | |
environment: | |
name: pypi | |
url: https://pypi.org/p/ga4gh-vrs | |
permissions: | |
id-token: write # IMPORTANT: mandatory for trusted publishing | |
steps: | |
- name: Download all the dists | |
uses: actions/download-artifact@v3 | |
with: | |
name: python-package-distributions | |
path: dist/ | |
- name: Publish distribution to PyPI | |
uses: pypa/gh-action-pypi-publish@release/v1 |