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g-torr/README.md

Welcome to my Github page πŸ’«

Hi there πŸ‘‹, I am Giuseppe Torrisi, I am a Reseach Fellow at the University of Edinburgh πŸ‡¬πŸ‡§

I have completed my PhD in Applied Mathematics at King's College London.

πŸ” What my research is about

I am part a global effort of Delta Leap to predict which patients will respond to chemotherapy and why. As part of the Schumacher group, I help developing the computational methods used to analyse the data generated by the experimental teams from patients with Triple Negative Breast Cancer. In the analysis, I contribute through different ML algorithms for visualisation, clustering and predictions.

Furthermore, I am interested in modelling of gene regulatory networks, I ask questions like "What are the key features that makes gene regulation so precise and effective?" This investigation requires a multidisciplinary approach and I develop mathematical modelling. My research interests include network theory and statistical mechanics.

What you can find here

Openess and transparency in research are very important, the code to reproduce my research papers is here!

Paper title Github repository
Uncovering the non-equilibrium stationary properties in sparse Boolean networks repository
Overcoming the complexity barrier of the dynamic message-passing method in networks with fat-tailed degree distributions repository
Percolation on the gene regulatory network repository

I had some fun coding as well! 🎁 Have you ever wondered how to recycle gifts you don't like to your friends without being caught? Well, here there is an implementation using genetic algorithms.

πŸ’» What languages can you expect to find here

I code mainly in Python, but here you can find also code in Matlab and CUDA C.

πŸ“« How to know more about my research or to reach me

Here is the link to my Google Scholar account and get updated with latest news from the Disordered Systems Group website. :dancers: I’m looking to collaborate on the integration of models with data. If you have any comments, ideas, or just want to approach me, please get in touch with me via email πŸ“« gtorrisi@ed.ac.uk

Pinned Loading

  1. dynamic_unlocking dynamic_unlocking Public

    Unlocking heterogeneity of node activation in Boolean networks through dynamic programming

    Jupyter Notebook 1 1

  2. percolation-grn percolation-grn Public

    Code to reproduce the results of the paper "Percolation on the gene regulatory network"

    Jupyter Notebook

  3. recycle_gift recycle_gift Public

    MATLAB

  4. uncovering-non-eq uncovering-non-eq Public

    Jupyter Notebook