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Error relating to the logging package when trying to generate R easyconfigs? #14

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verdurin opened this issue Dec 6, 2015 · 2 comments

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@verdurin
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verdurin commented Dec 6, 2015

I see the following error when trying to run the script to generate an updated easyconfig for R:

Error in as.environment(pos) : using 'as.environment(NULL)' is defunct
Calls: <Anonymous> -> assign
Execution halted

This is with the Fedora R RPM on a Fedora 23 system, with Bioconductor installed using BiocLite (to pick up the versions from the 3.2 release).

The R version is 3.2.2.

@pneerincx
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Don't know how to reproduce and debug this... Do you happen to automagically restore an environment from a previously stored workspace image? I run the generateEasyConfig.R script with Rscript and in a clean workspace...

@verdurin
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Don't think there was a polluted workspace.

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