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v0.1.4

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@fredericlemoine fredericlemoine released this 29 Nov 14:47
· 634 commits to master since this release
  • Modified EdgeIndex to use a more generic hashmap
  • Added the command compute edgetrees to export multifurcating trees corresponding to each edges
  • Added the possibility to have several trees as input of the prune command
  • Added an option to print transfer/mast distance between input tree edges and compared tree in the compare edgescommand
  • Added explanations for the help of command collapse brlen
  • Added pvalues attached to edges of the trees (for support)
  • Added an option for filtering branches in roccurve command
  • Added a preliminary and greedy quartet enumeration
  • Bug fixes:
    • Corrected the command line options for generate binarytree
    • Newick Parser: Now allow a length :<length> at the root node