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GFA output does not include overlaps #7

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edawson opened this issue Oct 13, 2019 · 0 comments
Open

GFA output does not include overlaps #7

edawson opened this issue Oct 13, 2019 · 0 comments
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enhancement New feature or request

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@edawson
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edawson commented Oct 13, 2019

The GFA output of svaha2 is currently valid GFA 1. However, minigraph requires GFA overlaps in its output. This means the current output of svaha2 is invalid as minigraph input, which is a real shame.
@edawson edawson added the enhancement New feature or request label Oct 13, 2019
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