From 238414735251284c472fcec391c922f5e07a22ac Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Jo=C3=A3o=20Vitor?= <jvfecav@gmail.com>
Date: Sat, 22 Jul 2023 10:17:21 -0300
Subject: [PATCH] refactor: Upgrade base time requirements (#19)

---
 conf/base.config                                   | 2 +-
 modules/nf-core/diamond/blastx/diamond-blastx.diff | 9 ++++++++-
 modules/nf-core/diamond/blastx/main.nf             | 1 +
 3 files changed, 10 insertions(+), 2 deletions(-)

diff --git a/conf/base.config b/conf/base.config
index 1854651..0158901 100644
--- a/conf/base.config
+++ b/conf/base.config
@@ -47,7 +47,7 @@ process {
         time   = { check_max( 16.h  * task.attempt, 'time'    ) }
     }
     withLabel:process_long {
-        time   = { check_max( 20.h  * task.attempt, 'time'    ) }
+        time   = { check_max( 48.h  * task.attempt, 'time'    ) }
     }
     withLabel:process_high_memory {
         memory = { check_max( 200.GB * task.attempt, 'memory' ) }
diff --git a/modules/nf-core/diamond/blastx/diamond-blastx.diff b/modules/nf-core/diamond/blastx/diamond-blastx.diff
index 8e1587a..6135e9e 100644
--- a/modules/nf-core/diamond/blastx/diamond-blastx.diff
+++ b/modules/nf-core/diamond/blastx/diamond-blastx.diff
@@ -1,7 +1,14 @@
 Changes in module 'nf-core/diamond/blastx'
 --- modules/nf-core/diamond/blastx/main.nf
 +++ modules/nf-core/diamond/blastx/main.nf
-@@ -5,7 +5,7 @@
+@@ -1,11 +1,13 @@
+ process DIAMOND_BLASTX {
+     tag "$meta.id"
+-    label 'process_medium'
++    label 'process_high'
++    label 'process_long'
++    label 'process_high_memory'
+ 
      conda "bioconda::diamond=2.0.15"
      container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
          'https://depot.galaxyproject.org/singularity/diamond:2.0.15--hb97b32f_0' :
diff --git a/modules/nf-core/diamond/blastx/main.nf b/modules/nf-core/diamond/blastx/main.nf
index c022bed..ccbf8b4 100644
--- a/modules/nf-core/diamond/blastx/main.nf
+++ b/modules/nf-core/diamond/blastx/main.nf
@@ -2,6 +2,7 @@ process DIAMOND_BLASTX {
     tag "$meta.id"
     label 'process_high'
     label 'process_long'
+    label 'process_high_memory'
 
     conda "bioconda::diamond=2.0.15"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?