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detect when a method doesn't return valid BedTool-supported output #113
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Perhaps at least add a note in the docs? Less confusing that way... |
Yep, good idea. Did you hit this with |
Just |
daler
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#213 adds some documentation. I will try implementing something like #110 (comment), xref #167 |
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BedTool.genome_coverage
sometimes returns bedGraph-like output, sometimes not. In fact, by default, it doesn't return a valid BED-ish format file.See #110, #111, #112.
note to future self: this prob needs yet another kwarg to
bedtool._wraps
, and you will need to go through BEDTools programs and args to work out which don't create valid output files.The text was updated successfully, but these errors were encountered: