From db35b2c3ff8aa42c7733c07c9d0cf9c897a3ca51 Mon Sep 17 00:00:00 2001 From: Aleksandr Serdiukov Date: Thu, 27 Jun 2024 02:50:14 +0400 Subject: [PATCH] Updated headers --- .idea/copyright/ITMO_HiCT_MIT.xml | 2 +- build.gradle.kts | 2 +- settings.gradle.kts | 2 +- .../ru/itmo/ctlab/hict/hict_library/assembly/AGPProcessor.java | 2 +- .../itmo/ctlab/hict/hict_library/assembly/FASTAProcessor.java | 2 +- .../itmo/ctlab/hict/hict_library/chunkedfile/ChunkedFile.java | 2 +- .../itmo/ctlab/hict/hict_library/chunkedfile/Initializers.java | 2 +- .../itmo/ctlab/hict/hict_library/chunkedfile/MatrixQueries.java | 2 +- .../hict/hict_library/chunkedfile/ScaffoldingOperations.java | 2 +- .../hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundle.java | 2 +- .../chunkedfile/hdf5/HDF5FileDatasetsBundleFactory.java | 2 +- .../hict_library/chunkedfile/hdf5/HDF5LibraryInitializer.java | 2 +- .../chunkedfile/resolution/ResolutionDescriptor.java | 2 +- .../hict/hict_library/chunkedfile/util/PathGenerators.java | 2 +- .../ru/itmo/ctlab/hict/hict_library/domain/ATUDescriptor.java | 2 +- .../ru/itmo/ctlab/hict/hict_library/domain/ATUDirection.java | 2 +- .../ru/itmo/ctlab/hict/hict_library/domain/AssemblyInfo.java | 2 +- .../itmo/ctlab/hict/hict_library/domain/ContigDescriptor.java | 2 +- .../ru/itmo/ctlab/hict/hict_library/domain/ContigDirection.java | 2 +- .../ru/itmo/ctlab/hict/hict_library/domain/ContigHideType.java | 2 +- .../ru/itmo/ctlab/hict/hict_library/domain/QueryLengthUnit.java | 2 +- .../itmo/ctlab/hict/hict_library/domain/ScaffoldDescriptor.java | 2 +- .../itmo/ctlab/hict/hict_library/domain/StripeDescriptor.java | 2 +- .../java/ru/itmo/ctlab/hict/hict_library/trees/ContigTree.java | 2 +- .../ru/itmo/ctlab/hict/hict_library/trees/ScaffoldTree.java | 2 +- .../java/ru/itmo/ctlab/hict/hict_library/util/BinarySearch.java | 2 +- .../java/ru/itmo/ctlab/hict/hict_library/util/CommonUtils.java | 2 +- .../hict/hict_library/util/matrix/SparseCOOMatrixLong.java | 2 +- .../hict/hict_library/visualization/RawTileWithWeights.java | 2 +- .../hict_library/visualization/SimpleVisualizationOptions.java | 2 +- .../hict_library/visualization/TileVisualizationProcessor.java | 2 +- .../ctlab/hict/hict_library/visualization/TileWithWeights.java | 2 +- .../hict/hict_library/visualization/colormap/Colormap.java | 2 +- .../hict_library/visualization/colormap/DoubleColormap.java | 2 +- .../visualization/colormap/gradient/SimpleLinearGradient.java | 2 +- .../java/ru/itmo/ctlab/hict/hict_server/HandlersHolder.java | 2 +- src/main/java/ru/itmo/ctlab/hict/hict_server/MainVerticle.java | 2 +- src/main/java/ru/itmo/ctlab/hict/hict_server/WebUIVerticle.java | 2 +- .../dto/request/scaffolding/MoveSelectionRangeRequestDTO.java | 2 +- .../request/scaffolding/MoveSelectionToDebrisRequestDTO.java | 2 +- .../request/scaffolding/ReverseSelectionRangeRequestDTO.java | 2 +- .../dto/request/scaffolding/ScaffoldRegionRequestDTO.java | 2 +- .../dto/request/scaffolding/SplitContigRequestDTO.java | 2 +- .../dto/request/scaffolding/UnscaffoldRegionRequestDTO.java | 2 +- .../hict_server/dto/request/tiles/ContrastRangeSettingsDTO.java | 2 +- .../hict_server/dto/request/tiles/NormalizationSettingsDTO.java | 2 +- .../hict/hict_server/dto/response/assembly/AssemblyInfoDTO.java | 2 +- .../hict_server/dto/response/assembly/ContigDescriptorDTO.java | 2 +- .../dto/response/assembly/ScaffoldDescriptorDTO.java | 2 +- .../hict_server/dto/response/fileop/OpenFileResponseDTO.java | 2 +- .../hict_server/dto/symmetric/visualization/ColormapDTO.java | 2 +- .../dto/symmetric/visualization/SimpleLinearGradientDTO.java | 2 +- .../dto/symmetric/visualization/VisualizationOptionsDTO.java | 2 +- .../hict/hict_server/handlers/fileop/FileOpHandlersHolder.java | 2 +- .../ctlab/hict/hict_server/handlers/files/FSHandlersHolder.java | 2 +- .../handlers/operations/ScaffoldingOpHandlersHolder.java | 2 +- .../hict/hict_server/handlers/tiles/TileHandlersHolder.java | 2 +- .../hict/hict_server/handlers/util/TileStatisticHolder.java | 2 +- .../hict/hict_server/util/shareable/ShareableWrappers.java | 2 +- .../java/ru/itmo/ctlab/hict/hict_server/TestMainVerticle.java | 2 +- 60 files changed, 60 insertions(+), 60 deletions(-) diff --git a/.idea/copyright/ITMO_HiCT_MIT.xml b/.idea/copyright/ITMO_HiCT_MIT.xml index 64db2c2..ec7497f 100644 --- a/.idea/copyright/ITMO_HiCT_MIT.xml +++ b/.idea/copyright/ITMO_HiCT_MIT.xml @@ -1,6 +1,6 @@ - \ No newline at end of file diff --git a/build.gradle.kts b/build.gradle.kts index 9fef07d..21c467e 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/settings.gradle.kts b/settings.gradle.kts index 4425fd7..a8452d8 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/AGPProcessor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/AGPProcessor.java index a4d9bbe..0ba3025 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/AGPProcessor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/AGPProcessor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/FASTAProcessor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/FASTAProcessor.java index 2d0ee09..d461c09 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/FASTAProcessor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/assembly/FASTAProcessor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ChunkedFile.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ChunkedFile.java index 0522b1a..ef85392 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ChunkedFile.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ChunkedFile.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/Initializers.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/Initializers.java index e3996a1..4cf96db 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/Initializers.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/Initializers.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/MatrixQueries.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/MatrixQueries.java index 0a552d0..18a30a1 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/MatrixQueries.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/MatrixQueries.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ScaffoldingOperations.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ScaffoldingOperations.java index 48c024b..a289ca3 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ScaffoldingOperations.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/ScaffoldingOperations.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundle.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundle.java index 7d3afc8..bd23e80 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundle.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundle.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundleFactory.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundleFactory.java index 6e26403..b8eb3fd 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundleFactory.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5FileDatasetsBundleFactory.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5LibraryInitializer.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5LibraryInitializer.java index 1f00852..584141f 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5LibraryInitializer.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/hdf5/HDF5LibraryInitializer.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/resolution/ResolutionDescriptor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/resolution/ResolutionDescriptor.java index 66b88e9..cc996cf 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/resolution/ResolutionDescriptor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/resolution/ResolutionDescriptor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/util/PathGenerators.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/util/PathGenerators.java index 3613587..cb157d3 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/util/PathGenerators.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/chunkedfile/util/PathGenerators.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDescriptor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDescriptor.java index 33c12ab..17f447b 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDescriptor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDescriptor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDirection.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDirection.java index 68d350d..2810065 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDirection.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ATUDirection.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/AssemblyInfo.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/AssemblyInfo.java index 4a23c03..94297bc 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/AssemblyInfo.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/AssemblyInfo.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDescriptor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDescriptor.java index f8b7891..1676606 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDescriptor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDescriptor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDirection.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDirection.java index 59b28f1..3d8a458 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDirection.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigDirection.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigHideType.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigHideType.java index 74c12e8..57e6041 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigHideType.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ContigHideType.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/QueryLengthUnit.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/QueryLengthUnit.java index 144d0e2..0fcddbb 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/QueryLengthUnit.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/QueryLengthUnit.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ScaffoldDescriptor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ScaffoldDescriptor.java index 4c2dda3..b7d91e0 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ScaffoldDescriptor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/ScaffoldDescriptor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/StripeDescriptor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/StripeDescriptor.java index 3152cee..5587fce 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/StripeDescriptor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/domain/StripeDescriptor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ContigTree.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ContigTree.java index f15fd75..369d011 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ContigTree.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ContigTree.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ScaffoldTree.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ScaffoldTree.java index 3519879..0d7c945 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ScaffoldTree.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/trees/ScaffoldTree.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/util/BinarySearch.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/util/BinarySearch.java index 45ad8a3..edb4469 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/util/BinarySearch.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/util/BinarySearch.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/util/CommonUtils.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/util/CommonUtils.java index b003b2d..e06d14e 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/util/CommonUtils.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/util/CommonUtils.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/util/matrix/SparseCOOMatrixLong.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/util/matrix/SparseCOOMatrixLong.java index 3844b3d..06b1ec7 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/util/matrix/SparseCOOMatrixLong.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/util/matrix/SparseCOOMatrixLong.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/RawTileWithWeights.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/RawTileWithWeights.java index cd7f0bc..9602858 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/RawTileWithWeights.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/RawTileWithWeights.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/SimpleVisualizationOptions.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/SimpleVisualizationOptions.java index 7b2ca16..814ca12 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/SimpleVisualizationOptions.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/SimpleVisualizationOptions.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileVisualizationProcessor.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileVisualizationProcessor.java index 5d4fe0c..c158a7b 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileVisualizationProcessor.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileVisualizationProcessor.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileWithWeights.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileWithWeights.java index efc776d..d26c50e 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileWithWeights.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/TileWithWeights.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/Colormap.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/Colormap.java index 7bb5044..54fec37 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/Colormap.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/Colormap.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/DoubleColormap.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/DoubleColormap.java index bf6143a..27af3af 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/DoubleColormap.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/DoubleColormap.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/gradient/SimpleLinearGradient.java b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/gradient/SimpleLinearGradient.java index 35a214c..17bf669 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/gradient/SimpleLinearGradient.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_library/visualization/colormap/gradient/SimpleLinearGradient.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/HandlersHolder.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/HandlersHolder.java index 5fef70a..9a274f4 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/HandlersHolder.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/HandlersHolder.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/MainVerticle.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/MainVerticle.java index 90d78ef..1b40068 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/MainVerticle.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/MainVerticle.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/WebUIVerticle.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/WebUIVerticle.java index 709d73c..71000c7 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/WebUIVerticle.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/WebUIVerticle.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionRangeRequestDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionRangeRequestDTO.java index a21089e..6c5c401 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionRangeRequestDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionRangeRequestDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionToDebrisRequestDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionToDebrisRequestDTO.java index 1cade36..a1f584b 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionToDebrisRequestDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/MoveSelectionToDebrisRequestDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ReverseSelectionRangeRequestDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ReverseSelectionRangeRequestDTO.java index 103fae6..4ca5349 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ReverseSelectionRangeRequestDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ReverseSelectionRangeRequestDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ScaffoldRegionRequestDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ScaffoldRegionRequestDTO.java index 0dbfefc..81b7005 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ScaffoldRegionRequestDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/ScaffoldRegionRequestDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/SplitContigRequestDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/SplitContigRequestDTO.java index 19612b2..c71e83c 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/SplitContigRequestDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/SplitContigRequestDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/UnscaffoldRegionRequestDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/UnscaffoldRegionRequestDTO.java index 9fa382b..356dd8d 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/UnscaffoldRegionRequestDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/scaffolding/UnscaffoldRegionRequestDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/ContrastRangeSettingsDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/ContrastRangeSettingsDTO.java index 41b836f..95a5c37 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/ContrastRangeSettingsDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/ContrastRangeSettingsDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/NormalizationSettingsDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/NormalizationSettingsDTO.java index f59df40..a00189d 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/NormalizationSettingsDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/request/tiles/NormalizationSettingsDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/AssemblyInfoDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/AssemblyInfoDTO.java index 4af1d75..0412b98 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/AssemblyInfoDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/AssemblyInfoDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ContigDescriptorDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ContigDescriptorDTO.java index cf91032..207d23e 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ContigDescriptorDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ContigDescriptorDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ScaffoldDescriptorDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ScaffoldDescriptorDTO.java index 5fc612a..2b20a6c 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ScaffoldDescriptorDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/assembly/ScaffoldDescriptorDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/fileop/OpenFileResponseDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/fileop/OpenFileResponseDTO.java index e5da6ff..4921c86 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/fileop/OpenFileResponseDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/response/fileop/OpenFileResponseDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/ColormapDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/ColormapDTO.java index d0fe165..7246305 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/ColormapDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/ColormapDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/SimpleLinearGradientDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/SimpleLinearGradientDTO.java index ac227b2..a79fe72 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/SimpleLinearGradientDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/SimpleLinearGradientDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/VisualizationOptionsDTO.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/VisualizationOptionsDTO.java index 915ca1b..537624c 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/VisualizationOptionsDTO.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/dto/symmetric/visualization/VisualizationOptionsDTO.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/fileop/FileOpHandlersHolder.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/fileop/FileOpHandlersHolder.java index 4573d19..644b127 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/fileop/FileOpHandlersHolder.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/fileop/FileOpHandlersHolder.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/files/FSHandlersHolder.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/files/FSHandlersHolder.java index 271d2c5..7d150ed 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/files/FSHandlersHolder.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/files/FSHandlersHolder.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/operations/ScaffoldingOpHandlersHolder.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/operations/ScaffoldingOpHandlersHolder.java index e50d2de..f3d842c 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/operations/ScaffoldingOpHandlersHolder.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/operations/ScaffoldingOpHandlersHolder.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/tiles/TileHandlersHolder.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/tiles/TileHandlersHolder.java index d19ecea..ac25b81 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/tiles/TileHandlersHolder.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/tiles/TileHandlersHolder.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/util/TileStatisticHolder.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/util/TileStatisticHolder.java index c39a4bc..ebc87d0 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/util/TileStatisticHolder.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/handlers/util/TileStatisticHolder.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/main/java/ru/itmo/ctlab/hict/hict_server/util/shareable/ShareableWrappers.java b/src/main/java/ru/itmo/ctlab/hict/hict_server/util/shareable/ShareableWrappers.java index 9dfd2b2..3cbaf78 100644 --- a/src/main/java/ru/itmo/ctlab/hict/hict_server/util/shareable/ShareableWrappers.java +++ b/src/main/java/ru/itmo/ctlab/hict/hict_server/util/shareable/ShareableWrappers.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal diff --git a/src/test/java/ru/itmo/ctlab/hict/hict_server/TestMainVerticle.java b/src/test/java/ru/itmo/ctlab/hict/hict_server/TestMainVerticle.java index ed0c74a..993cf2f 100644 --- a/src/test/java/ru/itmo/ctlab/hict/hict_server/TestMainVerticle.java +++ b/src/test/java/ru/itmo/ctlab/hict/hict_server/TestMainVerticle.java @@ -1,7 +1,7 @@ /* * MIT License * - * Copyright (c) 2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. + * Copyright (c) 2021-2024. Aleksandr Serdiukov, Anton Zamyatin, Aleksandr Sinitsyn, Vitalii Dravgelis and Computer Technologies Laboratory ITMO University team. * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal