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README.md

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Docker image to use samtools and biobambam2

Installed libraries

  • libdeflate v1.7
  • htslib v1.11
  • samtools v1.11
  • libmaus2 v2.0.770
  • biobambam2 v2.0.179

Usage

# build docker image
docker build -t <image_name>:<image_tag> <path/to/Dockerfile/folder>

# run image interactively
docker run --rm -it <image_name>