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The solvation properties of molecules, often estimated using quantum chemical simulations, are important in the synthesis of energy storage materials, drugs, and industrial chemicals. Here, we develop machine learning models of solvation energies to replace expensive quantum chemistry calculations with inexpensive-to-compute message-passing neural network models that require only the molecular graph as inputs. Our models are trained on a new database of solvation energies for 130,258 molecules taken from the QM9 dataset computed in five solvents (acetone, ethanol, acetonitrile, dimethyl sulfoxide, and water) via an implicit solvent model. Our best model achieves a mean absolute error of 0.5 kcal/mol for molecules with nine or fewer non-hydrogen atoms and 1 kcal/mol for molecules with between 10 and 14 non-hydrogen atoms. We make the entire dataset of 651,290 computed entries openly available and provide simple web and programmatic interfaces to enable others to run our solvation energy model on new molecules. This model calculates the solvation energies for molecules using only the SMILES string and also provides an estimate of whether each molecule is within the domain of applicability of our model. We envision that the dataset and models will provide the functionality needed for the rapid screening of large chemical spaces to discover improved molecules for many applications.
File details
Number of configurations: 130258
Method
DFT
Method (other)
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Software
None
Software (other)
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Software version(s)
No response
Additional details
No response
Property types
Band gap, Free energy, Potential energy
Other/additional property
No response
Property details
No response
Elements
No response
Number of Configurations
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Naming convention
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Configuration sets
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Configuration labels
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Distribution license
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The text was updated successfully, but these errors were encountered:
Name
Gregory Wolfe
Email
gw2338@nyu.edu
Dataset name
Foundry: DFT Estimates of Solvation Energy in Multiple Solvents
Authors
Ward, Logan; Dandu, Naveen; Blaiszik, Ben; Narayanan, Badri; Assary, Rajeev S.; Redfern, Paul C.; Foster, Ian; Curtiss, Larry A.
Publication link
https://doi.org/10.1021/acs.jpca.1c01960
Data link
10.18126/jos5-wj65
Additional links
No response
Dataset description
The solvation properties of molecules, often estimated using quantum chemical simulations, are important in the synthesis of energy storage materials, drugs, and industrial chemicals. Here, we develop machine learning models of solvation energies to replace expensive quantum chemistry calculations with inexpensive-to-compute message-passing neural network models that require only the molecular graph as inputs. Our models are trained on a new database of solvation energies for 130,258 molecules taken from the QM9 dataset computed in five solvents (acetone, ethanol, acetonitrile, dimethyl sulfoxide, and water) via an implicit solvent model. Our best model achieves a mean absolute error of 0.5 kcal/mol for molecules with nine or fewer non-hydrogen atoms and 1 kcal/mol for molecules with between 10 and 14 non-hydrogen atoms. We make the entire dataset of 651,290 computed entries openly available and provide simple web and programmatic interfaces to enable others to run our solvation energy model on new molecules. This model calculates the solvation energies for molecules using only the SMILES string and also provides an estimate of whether each molecule is within the domain of applicability of our model. We envision that the dataset and models will provide the functionality needed for the rapid screening of large chemical spaces to discover improved molecules for many applications.
File details
Number of configurations: 130258
Method
DFT
Method (other)
No response
Software
None
Software (other)
No response
Software version(s)
No response
Additional details
No response
Property types
Band gap, Free energy, Potential energy
Other/additional property
No response
Property details
No response
Elements
No response
Number of Configurations
No response
Naming convention
No response
Configuration sets
No response
Configuration labels
No response
Distribution license
No response
Permissions
The text was updated successfully, but these errors were encountered: