pyproject.toml

[project]
name = "suffix-tree"
dynamic = ["version"]
authors = [
  { name="Marcello Perathoner", email="marcello@perathoner.de" },
]
description = "A Generalized Suffix Tree for any iterable, with Lowest Common Ancestor retrieval"
readme = "README.rst"
requires-python = ">=3.9"
classifiers = [
    "Intended Audience :: Developers",
    "Intended Audience :: Information Technology",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Topic :: Text Processing :: Indexing",
    "Topic :: Text Processing :: Linguistic",
]
keywords = [
    "suffix",
    "tree",
    "suffixtree",
    "ukkonen",
    "gusfield",
    "lca"
]

[project.urls]
"Homepage"    = "https://github.com/cceh/suffix-tree"
"Bug Tracker" = "https://github.com/cceh/suffix-tree/issues"

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.hatch.version]
path = "src/suffix_tree/_version.py"

[tool.hatch.build.targets.sdist]
exclude = [
  "/.github",
  "/docs/_build",
]

[tool.hatch.build.targets.wheel]
packages = ["src/suffix_tree"]

[tool.pytest.ini_options]
addopts = [
    "--import-mode=importlib",
]

[tool.coverage.report]
exclude_lines = [
    "pragma: no cover",
    "raise NotImplemented",
]

[tool.black]

[tool.mypy]
ignore_missing_imports = true

[tool.pylint.basic]
disable = [
    "invalid-name",
    "unspecified-encoding",
    "pointless-string-statement",
    "too-many-branches",
    "too-many-statements"
]

[tool.pylint.format]
max-line-length = 88

[tool.pydocstyle]
add_ignore = "D105,D107,D202"

[tool.doc8]
max-line-length = 88

[tool.tox]
legacy_tox_ini = """

[tox]
isolated_build = True
envlist = pypy39,py39,py310,py311,py312
skip_missing_interpreters = True

[testenv]
allowlist_externals = make
deps =
  pytest
  requests
commands = make BIN= test
"""