From dd4ed077562195abe20cc3549653ef5592e4f1e1 Mon Sep 17 00:00:00 2001 From: Jean Cochrane Date: Mon, 23 Oct 2023 17:23:00 -0500 Subject: [PATCH] Add Dockerfile and workflow for building and pushing Docker image to ghcr --- .github/workflows/deploy.yaml | 52 +++++++++++++++++++++++++++++++++++ Dockerfile | 12 ++++++++ 2 files changed, 64 insertions(+) create mode 100644 .github/workflows/deploy.yaml create mode 100644 Dockerfile diff --git a/.github/workflows/deploy.yaml b/.github/workflows/deploy.yaml new file mode 100644 index 00000000..c6b3bf27 --- /dev/null +++ b/.github/workflows/deploy.yaml @@ -0,0 +1,52 @@ +name: deploy + +on: + pull_request: + push: + branches: [main, '*-assessment-year'] + +env: + REGISTRY: ghcr.io + IMAGE_NAME: ${{ github.repository }} + +jobs: + publish-docker-image: + runs-on: ubuntu-latest + # Set token permissions so that we can publish to GitHub Container Registry + permissions: + contents: read + packages: write + steps: + - name: Checkout + uses: actions/checkout@v4 + + - name: Login to GitHub Container Registry + uses: docker/login-action@v3 + with: + registry: ${{ env.REGISTRY }} + username: ${{ github.actor }} + password: ${{ secrets.GITHUB_TOKEN }} + + - name: Extract metadata (tags, labels) for Docker + id: meta + uses: docker/metadata-action@v5 + with: + images: ${{ env.registry }}/${{ env.IMAGE_NAME }} + # Tag the following types of images: + # * On a branch, tag with the branch name (e.g. `master`) + # * On a PR, tag with the PR number (e.g. `pr-12`) + # * On all events, tag with the short git SHA (e.g. `e956384`) + tags: | + type=ref,event=branch + type=ref,event=pr + type=sha + + - name: Build and push Docker image + uses: docker/build-push-action@v5 + with: + context: . + push: true + tags: ${{ steps.meta.outputs.tags }} + labels: ${{ steps.meta.outputs.labels }} + cache-from: type=gha + cahe-to: type=gha,mode=max diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 00000000..e62aadf7 --- /dev/null +++ b/Dockerfile @@ -0,0 +1,12 @@ +FROM rocker/r-ver:4.3.1 + +# Install system dependencies +RUN apt-get update && apt-get install --no-install-recommends -y \ + libcurl4-openssl-dev libssl-dev libxml2-dev libgit2-dev git \ + libudunits2-dev python3-dev python3-pip + +# Install DVC to fetch data from S3 using dvc pull +RUN pip install aiobotocore[boto3] boto3 dvc[s3] + +# Install R dependencies +RUN Rscript -e 'renv::restore()'