From b4502690a193b0e5bd560119b6238b779849cfd8 Mon Sep 17 00:00:00 2001
From: Keiran Raine <kr2@sanger.ac.uk>
Date: Sat, 25 Mar 2017 16:34:34 +0000
Subject: [PATCH] Silly inversion of test

---
 Dockerfile            | 2 +-
 Dockstore.cwl         | 2 +-
 scripts/ds-wrapper.pl | 2 +-
 3 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index cb0fb93..ad07c7c 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -3,7 +3,7 @@ FROM  quay.io/wtsicgp/dockstore-cgpwxs:2.0.5
 MAINTAINER  keiranmraine@gmail.com
 
 LABEL uk.ac.sanger.cgp="Cancer Genome Project, Wellcome Trust Sanger Institute" \
-      version="1.0.3" \
+      version="1.0.4" \
       description="The CGP WGS pipeline for dockstore.org"
 
 USER  root
diff --git a/Dockstore.cwl b/Dockstore.cwl
index 3275b47..56eea25 100644
--- a/Dockstore.cwl
+++ b/Dockstore.cwl
@@ -19,7 +19,7 @@ dct:creator:
 
 requirements:
   - class: DockerRequirement
-    dockerPull: "quay.io/wtsicgp/dockstore-cgpwgs:1.0.3"
+    dockerPull: "quay.io/wtsicgp/dockstore-cgpwgs:1.0.4"
 
 hints:
   - class: ResourceRequirement
diff --git a/scripts/ds-wrapper.pl b/scripts/ds-wrapper.pl
index c5ba7f1..dd1dd22 100644
--- a/scripts/ds-wrapper.pl
+++ b/scripts/ds-wrapper.pl
@@ -79,7 +79,7 @@
 ref_unpack($ref_area, $opts{'a'});
 ref_unpack($ref_area, $opts{'si'});
 ref_unpack($ref_area, $opts{'cs'});
-ref_unpack($ref_area, $opts{'sc'}) if(exists $opts{'sb'});
+ref_unpack($ref_area, $opts{'sc'}) if(! exists $opts{'sb'});
 
 ## now complete the caveman flaging file correctly
 my $ini = add_species_flag_ini($opts{'sp'}, "$ref_area/caveman/flag.vcf.config.WGS.ini");