From fb2f78547dad7ecfc04b0fd0e2368a70303707f3 Mon Sep 17 00:00:00 2001 From: Micah Rickles-Young Date: Tue, 15 Oct 2024 11:50:18 -0400 Subject: [PATCH] fixing missed input statement --- .../GenerateDuplexConsensusBams/GenerateDuplexConsensusBams.wdl | 1 + 1 file changed, 1 insertion(+) diff --git a/Liquid_Biopsy_Duplex_Analysis/GenerateDuplexConsensusBams/GenerateDuplexConsensusBams.wdl b/Liquid_Biopsy_Duplex_Analysis/GenerateDuplexConsensusBams/GenerateDuplexConsensusBams.wdl index fab55a9..b506717 100644 --- a/Liquid_Biopsy_Duplex_Analysis/GenerateDuplexConsensusBams/GenerateDuplexConsensusBams.wdl +++ b/Liquid_Biopsy_Duplex_Analysis/GenerateDuplexConsensusBams/GenerateDuplexConsensusBams.wdl @@ -70,6 +70,7 @@ workflow GenerateDuplexConsensusBams { } if(copy_umi_or_default){ call copyUmi.CopyUmiTask as CopyUmiTask { + input: bam_file = bam_file, bam_index = bam_index, base_name = base_name