From b8038d0e40a05b8b08e3aac33cb3196ad136286f Mon Sep 17 00:00:00 2001
From: bartulem <mimica.bartul@gmail.com>
Date: Sat, 31 Aug 2024 19:07:23 -0400
Subject: [PATCH] v0.3.12 sort video files by name before concatenation & get
 precise IPI start frame

---
 README.md                | 2 +-
 setup.py                 | 2 +-
 src/file_manipulation.py | 6 +++---
 src/synchronize_files.py | 4 ++--
 src/usv_playpen_gui.py   | 4 ++--
 5 files changed, 9 insertions(+), 9 deletions(-)

diff --git a/README.md b/README.md
index cd5a4ea..8fd6f85 100644
--- a/README.md
+++ b/README.md
@@ -1,4 +1,4 @@
-# usv-playpen v0.3.11
+# usv-playpen v0.3.12
 
 <br>
 <div align="center">
diff --git a/setup.py b/setup.py
index 5f409c6..28b5abd 100644
--- a/setup.py
+++ b/setup.py
@@ -5,7 +5,7 @@
 
 setup(
     name='usv-playpen',
-    version='0.3.11',
+    version='0.3.12',
     author='@bartulem',
     author_email='mimica.bartul@gmail.com',
     classifiers=[
diff --git a/src/file_manipulation.py b/src/file_manipulation.py
index e83068d..aaf4347 100644
--- a/src/file_manipulation.py
+++ b/src/file_manipulation.py
@@ -554,8 +554,8 @@ def concatenate_audio_files(self):
 
         for audio_file_type in self.input_parameter_dict['concatenate_audio_files']['concat_dirs']:
 
-            all_audio_files = glob.glob(f"{self.root_directory}{os.sep}audio{os.sep}{audio_file_type}{os.sep}"
-                                        f"*.{self.input_parameter_dict['concatenate_audio_files']['audio_format']}")
+            all_audio_files = sorted(glob.glob(f"{self.root_directory}{os.sep}audio{os.sep}{audio_file_type}{os.sep}"
+                                               f"*.{self.input_parameter_dict['concatenate_audio_files']['audio_format']}"))
 
             if len(all_audio_files) > 1:
 
@@ -621,7 +621,7 @@ def concatenate_video_files(self):
 
                 vid_name = f"{self.input_parameter_dict['concatenate_video_files']['concatenated_video_name']}_{sub_directory.split('.')[-1]}"
                 vid_extension = self.input_parameter_dict['concatenate_video_files']['video_extension']
-                all_video_files = glob.glob(f"{current_working_dir}{os.sep}*.{vid_extension}")
+                all_video_files = sorted(glob.glob(f"{current_working_dir}{os.sep}*.{vid_extension}"))
 
                 if len(all_video_files) > 1:
 
diff --git a/src/synchronize_files.py b/src/synchronize_files.py
index 654c656..04ba561 100644
--- a/src/synchronize_files.py
+++ b/src/synchronize_files.py
@@ -539,11 +539,11 @@ def find_video_sync_trains(self, camera_fps, total_frame_number):
                                         if even_event_durations.sum() > odd_event_durations.sum():
                                             ipi_durations_frames = even_event_durations - 1
                                             if type(ipi_start_frames) is int:
-                                                temp_ipi_start_frames = np.array(significant_events[::2]) + 1
+                                                temp_ipi_start_frames = np.array(significant_events[::2]) + 2
                                         else:
                                             ipi_durations_frames = odd_event_durations - 1
                                             if type(ipi_start_frames) is int:
-                                                temp_ipi_start_frames = np.array(significant_events[1::2]) + 1
+                                                temp_ipi_start_frames = np.array(significant_events[1::2]) + 2
 
                                         # compute IPI durations in milliseconds
                                         ipi_durations_ms = np.round(ipi_durations_frames * (1000 / camera_fps[sync_cam_idx]))
diff --git a/src/usv_playpen_gui.py b/src/usv_playpen_gui.py
index e9facdf..b5b8cb1 100644
--- a/src/usv_playpen_gui.py
+++ b/src/usv_playpen_gui.py
@@ -49,7 +49,7 @@
     my_app_id = 'mycompany.myproduct.subproduct.version'
     ctypes.windll.shell32.SetCurrentProcessExplicitAppUserModelID(my_app_id)
 
-app_name = 'USV Playpen v0.3.11'
+app_name = 'USV Playpen v0.3.12'
 experimenter_id = 'bartulem'
 cup_directory_name = 'Bartul'
 email_list_global = ''
@@ -451,7 +451,7 @@ def record_two(self):
                                        'display': '2', 'total_mic_number': '24', 'total_device_num': '2',
                                        'used_mics': '0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23',
                                        'cpu_priority': 'high',
-                                       'cpu_affinity': '5'}
+                                       'cpu_affinity': '6'}
 
         row_start_position_label = 5
         row_start_position_line_edit = 120