added meta-analysis example to slides 7 and minted improvements #365
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: | |
| push: | |
| branches: | |
| - master | |
| workflow_dispatch: | |
| # paths: ['**.Rmd'] | |
| name: Render and Publish Website | |
| permissions: | |
| contents: write | |
| pages: write | |
| jobs: | |
| render-website: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out the repo | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| token: ${{ secrets.GH_ACTION }} | |
| - name: Check out private repo with assignments | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: 'avehtari/bda_course' | |
| path: 'bda_course' | |
| fetch-depth: 1 | |
| token: ${{ secrets.GH_ACTION }} | |
| - name: Copy assignments | |
| run: cp -r bda_course/assignments/ assignments/ | |
| - name: Set up Quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| with: | |
| tinytex: true | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| extra-repositories: 'https://avehtari.r-universe.dev https://stan-dev.r-universe.dev' | |
| - name: Install R dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache: "always" | |
| packages: | |
| any::dplyr | |
| any::tidyr | |
| any::rmarkdown | |
| any::knitr | |
| any::markmyassignment | |
| any::aaltobda | |
| any::bayesplot | |
| any::brms | |
| any::posterior | |
| any::latex2exp | |
| any::ggplot2 | |
| any::ggdist | |
| any::cmdstanr | |
| - name: Cache CmdStan | |
| id: cache-cmdstan | |
| uses: actions/cache@v4 | |
| with: | |
| path: ~/.cmdstan | |
| key: gha-cmdstan | |
| - name: Setup cmdstan | |
| if: steps.cache-cmdstan.outputs.cache-hit != 'true' | |
| run: cmdstanr::install_cmdstan(cores = 2) | |
| shell: Rscript {0} | |
| - name: Render and Publish Website | |
| uses: quarto-dev/quarto-actions/publish@v2 | |
| with: | |
| target: gh-pages |