diff --git a/pyhmmer/plan7.pyx b/pyhmmer/plan7.pyx index d6c6837..be838d7 100644 --- a/pyhmmer/plan7.pyx +++ b/pyhmmer/plan7.pyx @@ -6325,7 +6325,7 @@ cdef class Pipeline: ) except 1 nogil: cdef int status cdef P7_OPROFILE* om - cdef ESL_ALPHABET* abc = NULL + cdef ESL_ALPHABET* abc = sq.abc # configure the pipeline for the current sequence status = libhmmer.p7_pipeline.p7_pli_NewSeq(pli, sq)