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STAR 2.7.5b --- 2020/08/01
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@alexdobin alexdobin released this 01 Aug 15:58
· 263 commits to master since this release
2.7.5b
a6076cd

Bug-fix release.

  • Issue #558: Fixed a bug that can cause a seg-fault in STARsolo run with paired-end reads that have protruding ends.
  • Issue #952: Increased the maximum allowed length of the SAM tags in the input SAM files.
  • Issue #955: fixed seg-fault-causing bug for --soloFeatures SJ option.
  • Issue #963: When reading GTF file, skip any exons that extend past the end of the chromosome, and give a warning.
  • Issue #965: output genome sizes with and without padding into Log.out.
  • Docker build: switched to debian:stable-slim in the Dockerfile.
  • --soloType CB_samTagOut now allows output of (uncorrected) UMI sequences and quality scores with SAM tags UR and UY.
  • Throw an error if FIFO file cannot be created on non-Linux partitions.
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