diff --git a/CHANGES.md b/CHANGES.md index be7df092..33ec88f4 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -1,7 +1,16 @@ -* Issue #965: output genome sizes with and without padding into Log.out. +STAR 2.7.5a --- 2020/08/01 +====================== +Bug-fix release. +---------------- + +* Issue #558: Fixed a bug that can cause a seg-fault in STARsolo run with paired-end reads that have protruding ends. +* Issue #952: Increased the maximum allowed length of the SAM tags in the input SAM files. * Issue #955: fixed seg-fault-causing bug for --soloFeatures SJ option. +* Issue #963: When reading GTF file, skip any exons that extend past the end of the chromosome, and give a warning. +* Issue #965: output genome sizes with and without padding into Log.out. * Docker build: switched to debian:stable-slim in the Dockerfile. * --soloType CB_samTagOut now allows output of (uncorrected) UMI sequences and quality scores with SAM tags UR and UY. +* Throw an error if FIFO file cannot be created on non-Linux partitions. STAR 2.7.5a 2020/06/16 ====================== diff --git a/README.md b/README.md index 047ea377..8d7f0358 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,7 @@ STAR 2.7 ======== Spliced Transcripts Alignment to a Reference -© Alexander Dobin, 2009-2019 +© Alexander Dobin, 2009-2020 https://www.ncbi.nlm.nih.gov/pubmed/23104886 AUTHOR/SUPPORT diff --git a/bin/MacOSX_x86_64/STAR b/bin/MacOSX_x86_64/STAR index 6459f9ca..eb1f5604 100755 Binary files a/bin/MacOSX_x86_64/STAR and b/bin/MacOSX_x86_64/STAR differ diff --git a/bin/MacOSX_x86_64/STARlong b/bin/MacOSX_x86_64/STARlong index 2ed112ae..ec97bf79 100755 Binary files a/bin/MacOSX_x86_64/STARlong and b/bin/MacOSX_x86_64/STARlong differ