NAMESPACE

# Generated by roxygen2: do not edit by hand

export("%>%")
export(add_context_seq)
export(add_identified_in_RNA)
export(add_peptide)
export(add_tx)
export(annotate_mmsplice)
export(annotate_mut_effect)
export(bed_to_junc)
export(breakpoint2junc)
export(canonical_junctions)
export(choose_tx)
export(combine_mut_junc)
export(exon_in_intron)
export(filter_irfinder_txt)
export(format_cispliceai_thresh)
export(format_pangolin)
export(format_spliceai)
export(format_spliceai_thresh)
export(generate_combined_dataset)
export(generate_junction_id)
export(get_exon_inclusion_junction)
export(get_exon_skipping_junction)
export(get_intronretention_alt_pos)
export(get_intronretention_genomic_alt_pos)
export(get_junc_pos)
export(import_leafcutter_counts)
export(import_regtools_junc)
export(import_spladder)
export(import_stringtie_gtf)
export(is_canonical)
export(is_in_rnaseq)
export(junc2breakpoint)
export(junc_to_gr)
export(leafcutter_transform)
export(liftover_junc_id)
export(map_requant)
export(modify_tx)
export(parse_cispliceai_thresh)
export(parse_gtf)
export(parse_irfinder_txt)
export(parse_mmsplice)
export(parse_pangolin)
export(parse_spliceai)
export(parse_spliceai_thresh)
export(parse_star_sj)
export(read_requant)
export(read_suppa_ioe)
export(regtools_transform)
export(seq_truncate_nonstop)
export(spladder_transform)
export(spladder_transform_format)
export(stringtie_transform)
export(stringtie_transform_format)
export(suppa_import)
export(suppa_transform)
export(suppa_transform_format)
export(transform_for_requant)
export(transform_leafcutter_counts)
export(transform_regtools_junc)
export(unique_junc_mmsplice)
export(unique_mut_junc)
import(dplyr)
import(purrr)
import(readr)
import(stringr)
import(tidyr)
importFrom(magrittr,"%>%")